D. melanogaster Gene: Syt1 - FBgn0004242 - Drosophila melanogaster (fruit fly)

General information

Ensembl IDFBgn0004242
NameSyt1
DescriptionSynaptotagmin 1 [Source:FlyBase gene name;Acc:FBgn0004242]
OrganismDrosophila melanogaster (fruit fly)
Synonym(s)a4v023, cg3139, cg3139-pa, cg3139-pb, cg3139-pc, cg3139-ra, cg3139-rb, cg3139-rc, d. syt i, dmel\cg3139, droso1, dsypt, dsyt, dsyt1, dsyt2, dsyti, fbgn0005767, fbgn0022151, l(2)23ab1, l(2)23ba, l(2)k05909, m9pb17, m9pe99, q7ku16, q86nn2, q8mrr8, q9vqg7, q9vqg8, sty1, synaptoptagmin 1, synaptotagmin, synaptotagmin 1, synaptotagmin i, synaptotagmin-1, synaptotagmin-i, synaptotagmin1, synaptotagmini, syt, syt 1, syt i, syt-1, syt-pa, syt-pb, syt-pc, syt-ra, syt-rb, syt-rc, syt1, syti, unnamed

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001017central nervous system
  • FBdv:00005355pharate adult stage P8 (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
  • FBdv:00005335embryonic stage 17 (Drosophila)
259
  • 259
  • 949
  • 8.62e3
98.50551
  • 98.50551
  • 94.50522
  • 50.00290
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
304
  • 304
98.24351
  • 98.24351
AEIR
  • AEIR
UBERON:0000033head
  • FBdv:00007076day 1 of adulthood (Drosophila)
  • FBdv:00007079day 4 of adulthood (Drosophila)
  • UBERON:0000104life cycle
  • FBdv:00007078day 3 of adulthood (Drosophila)
  • FBdv:00007095day 20 of adulthood (Drosophila)
  • FBdv:00007083day 8 of adulthood (Drosophila)
  • FBdv:00007085day 10 of adulthood (Drosophila)
  • FBdv:00005364pharate adult stage P13 (Drosophila)
  • UBERON:0000066fully formed stage
320
  • 320
  • 341
  • 387
  • 449
  • 498
  • 527
  • 561
  • 818
  • 2.06e3
98.14947
  • 98.14947
  • 98.02957
  • 97.75997
  • 97.40526
  • 97.11990
  • 96.94823
  • 96.75203
  • 95.26548
  • 88.05102
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003917arthropod fat body
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00005355pharate adult stage P8 (Drosophila)
  • UBERON:0000069larval stage
  • UBERON:0000066fully formed stage
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
  • UBERON:0004730instar larval stage
899
  • 899
  • 993
  • 1.75e3
  • 2.73e3
  • 3.04e3
  • 4.56e3
  • 7.72e3
94.79598
  • 94.79598
  • 94.24907
  • 89.85969
  • 84.20205
  • 82.35500
  • 73.55688
  • 55.23098
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003143pupa
  • FBdv:00005366pharate adult stage P15 (Drosophila)
  • FBdv:00005356pharate adult stage P9 (Drosophila)
  • FBdv:00005355pharate adult stage P8 (Drosophila)
  • FBdv:00005353pupal stage P6 (Drosophila)
  • UBERON:0000070pupal stage
  • FBdv:00005348prepupal stage P4(ii) (Drosophila)
1.24e3
  • 1.24e3
  • 1.69e3
  • 2.15e3
  • 3.42e3
  • 3.61e3
  • 3.66e3
92.80989
  • 92.80989
  • 90.22855
  • 87.53508
  • 80.19857
  • 79.09323
  • 78.80189
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000972antenna
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
92.74600
  • 92.74600
AEIR
  • AEIR
UBERON:0003153head capsule
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
91.00702
  • 91.00702
AEIR
  • AEIR
UBERON:0000922embryo
  • FBdv:00005335embryonic stage 17 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • UBERON:0000068embryo stage
  • FBdv:00005331dorsal closure stage (Drosophila)
  • FBdv:00004450late extended germ band stage (Drosophila)
  • FBdv:00005304blastoderm stage (Drosophila)
  • FBdv:00014201early extended germ band stage (Drosophila)
  • FBdv:00005306embryonic stage 4 (Drosophila)
  • FBdv:00005324embryonic stage 10 (Drosophila)
  • FBdv:00005321extended germ band stage (Drosophila)
  • FBdv:00005290pre-blastoderm stage (Drosophila)
  • FBdv:00005293embryonic stage 2 (Drosophila)
1.57e3
  • 1.57e3
  • 2.51e3
  • 4.84e3
  • 7.57e3
  • 8.55e3
  • 8.66e3
  • 8.66e3
  • 9.28e3
  • 9.39e3
  • 9.67e3
  • 9.91e3
  • 1.09e4
  • 1.10e4
90.91587
  • 90.91587
  • 85.43692
  • 71.93704
  • 56.14523
  • 50.42272
  • 49.80305
  • 49.79279
  • 46.22646
  • 45.55641
  • 43.96115
  • 42.55595
  • 36.95542
  • 36.50597
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • FBdv:00007076day 1 of adulthood (Drosophila)
  • FBdv:00007105day 30 of adulthood (Drosophila)
  • FBdv:00007080day 5 of adulthood (Drosophila)
  • FBdv:00007078day 3 of adulthood (Drosophila)
  • UBERON:0000066fully formed stage
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00007092day 17 of adulthood (Drosophila)
1.93e3
  • 1.93e3
  • 3.11e3
  • 3.44e3
  • 4.87e3
  • 4.90e3
  • 6.98e3
  • 8.59e3
88.83894
  • 88.83894
  • 81.98811
  • 80.05850
  • 71.75667
  • 71.57966
  • 59.52800
  • 50.21452
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • FBdv:00005337first instar larval stage (Drosophila)
  • FBdv:00007021third instar - cleared gut stage (Drosophila)
  • FBdv:00007020third instar - partially cleared gut stage (Drosophila)
  • FBdv:00007019third instar - uncleared gut stage (Drosophila)
  • UBERON:0000069larval stage
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00005338second instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
  • FBdv:00007007late third instar larval stage (Drosophila)
  • FBdv:00007005third instar larval stage L2 (Drosophila)
  • UBERON:0004730instar larval stage
2.77e3
  • 2.77e3
  • 3.36e3
  • 3.39e3
  • 3.58e3
  • 5.26e3
  • 5.41e3
  • 5.95e3
  • 6.28e3
  • 6.34e3
  • 6.68e3
  • 6.86e3
83.96701
  • 83.96701
  • 80.52383
  • 80.37013
  • 79.26345
  • 69.52690
  • 68.63288
  • 65.48701
  • 63.57334
  • 63.25064
  • 61.25673
  • 60.24130
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003142prepupa
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00005342prepupal stage (Drosophila)
3.17e3
  • 3.17e3
  • 6.86e3
81.65428
  • 81.65428
  • 60.22124
AEIR
  • AEIR
  • AEIR
FBbt:00003624adult brain (Drosophila)
  • UBERON:0000066fully formed stage
3.45e3
  • 3.45e3
80.00348
  • 80.00348
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
3.46e3
  • 3.46e3
  • 5.13e3
  • 5.65e3
79.96034
  • 79.96034
  • 70.28137
  • 67.27337
AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001134presumptive embryonic/larval peripheral nervous system (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
  • FBdv:00005335embryonic stage 17 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
4.31e3
  • 4.31e3
  • 4.31e3
  • 4.31e3
  • 8.62e3
  • 8.63e3
75.00290
  • 75.00290
  • 75.00290
  • 75.00290
  • 50.00290
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00004520mouthpart (Drosophila)
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
74.83592
  • 74.83592
AEIR
  • AEIR
UBERON:0013765digestive system element
  • FBdv:00005339third instar larval stage (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00007076day 1 of adulthood (Drosophila)
  • FBdv:00007095day 20 of adulthood (Drosophila)
  • FBdv:00007079day 4 of adulthood (Drosophila)
5.81e3
  • 5.81e3
  • 6.30e3
  • 7.56e3
  • 8.61e3
  • 8.99e3
66.29702
  • 66.29702
  • 63.45884
  • 56.15579
  • 50.08424
  • 47.88631
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000934ventral nerve cord
  • FBdv:00005334embryonic stage 16 (Drosophila)
  • FBdv:00005335embryonic stage 17 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
6.47e3
  • 6.47e3
  • 8.62e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
62.49710
  • 62.49710
  • 50.00290
  • 49.99420
  • 49.99420
  • 49.99130
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001045midgut
  • UBERON:0000069larval stage
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
  • 7.16e3
61.94341
  • 61.94341
  • 58.51113
AEIR
  • AEIR
  • AEIR
UBERON:0001054Malpighian tubule
  • UBERON:0000066fully formed stage
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • UBERON:0000104life cycle
7.50e3
  • 7.50e3
  • 7.84e3
  • 8.15e3
56.51090
  • 56.51090
  • 54.54511
  • 52.78293
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000939imaginal disc
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
7.61e3
  • 7.61e3
  • 8.21e3
55.87854
  • 55.87854
  • 52.40880
AEIR
  • AEIR
  • AEIR
FBbt:00001768eye disc (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
8.25e3
  • 8.25e3
52.19399
  • 52.19399
AEIR
  • AEIR
FBbt:00004514second segment of antenna (Drosophila)
  • UBERON:0000066fully formed stage
8.34e3
  • 8.34e3
51.62541
  • 51.62541
AEIR
  • AEIR
UBERON:0000992female gonad
  • FBdv:00007079day 4 of adulthood (Drosophila)
  • UBERON:0000066fully formed stage
8.55e3
  • 8.55e3
  • 1.07e4
50.46307
  • 50.46307
  • 38.06754
AEIR
  • AEIR
  • AEIR
FBbt:00001056presumptive embryonic/larval central nervous system (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
  • FBdv:00005335embryonic stage 17 (Drosophila)
8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001911embryonic/larval nervous system (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001060embryonic brain (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
49.99420
  • 49.99420
  • 49.99420
  • 49.99420
  • 49.99420
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005399male reproductive gland
  • FBdv:00007079day 4 of adulthood (Drosophila)
1.02e4
  • 1.02e4
40.60604
  • 40.60604
AEIR
  • AEIR
UBERON:0000473testis
  • FBdv:00007079day 4 of adulthood (Drosophila)
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 1.16e4
39.48006
  • 39.48006
  • 32.82520
AEIR
  • AEIR
  • AEIR
FBbt:00004052thoracico-abdominal ganglion (Drosophila)
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
33.57056
  • 33.57056
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAE014134, AY119455, BT004498, M55048
EnsemblFBgn0004242 (Syt1)
FlyBaseCG3139, FBgn0004242 (Syt1)
Uniprot/SPTREMBLX2J4C1, X2J4C1_DROME, X2J979, X2J979_DROME
Uniprot/SWISSPROTP21521, SY65_DROME

Do not show this banner again