D. melanogaster Gene: cyc - FBgn0023094 - Drosophila melanogaster (fruit fly)

General information

Ensembl IDFBgn0023094
Namecyc
Descriptioncycle [Source:FlyBase gene name;Acc:FBgn0023094]
OrganismDrosophila melanogaster (fruit fly)
Synonym(s)bhlhe7, bmal1, brain and muscle arnt-like 1, cg8727, cg8727-pa, cg8727-ra, cyc, cycle, dbma1, dbmal, dbmal1, dcyc, dmel\cg8727, fbgn0024953, fbgn0025108, mop3, o76344, q1lz29, q540w7, q9vw44

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003199egg chamber
  • FBdv:00005286egg stage
1.53e3
  • 1.53e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0000922embryo
  • FBdv:00005304blastoderm stage (Drosophila)
  • FBdv:00005293embryonic stage 2 (Drosophila)
  • FBdv:00005290pre-blastoderm stage (Drosophila)
  • FBdv:00005306embryonic stage 4 (Drosophila)
  • FBdv:00005309embryonic cycle 13 (Drosophila)
  • FBdv:00005312embryonic cycle 14 (Drosophila)
  • FBdv:00005311embryonic stage 5 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • UBERON:0000068embryo stage
  • FBdv:00004450late extended germ band stage (Drosophila)
  • FBdv:00005321extended germ band stage (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
  • FBdv:00005331dorsal closure stage (Drosophila)
  • FBdv:00005335embryonic stage 17 (Drosophila)
1.58e3
  • 1.58e3
  • 1.69e3
  • 3.77e3
  • 4.25e3
  • 5.11e3
  • 6.48e3
  • 7.17e3
  • 7.44e3
  • 7.65e3
  • 8.72e3
  • 9.07e3
  • 9.15e3
  • 9.26e3
  • 1.15e4
90.85
  • 90.85
  • 90.19
  • 78.14
  • 75.38
  • 70.40
  • 62.43
  • 58.41
  • 56.85
  • 55.67
  • 49.45
  • 47.43
  • 46.97
  • 46.35
  • 33.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • FBdv:00007079day 4 of adulthood (Drosophila)
  • UBERON:0000066fully formed stage
  • FBdv:00005266oogenesis stage S6
1.59e3
  • 1.59e3
  • 2.07e3
  • 8.49e3
90.81
  • 90.81
  • 88.02
  • 50.78
AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00003023adult abdomen (Drosophila)
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
90.21
  • 90.21
AEIR
  • AEIR
CL:0000655secondary oocyte
  • FBdv:00005283oogenesis stage S14
1.89e3
  • 1.89e3
89.06
  • 89.06
AEIR
  • AEIR
FBbt:00004514second segment of antenna (Drosophila)
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
88.54
  • 88.54
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
87.31
  • 87.31
AEIR
  • AEIR
FBbt:00005725adult Malpighian tubule (Drosophila)
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
86.50
  • 86.50
AEIR
  • AEIR
UBERON:0001044saliva-secreting gland
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
2.33e3
  • 2.33e3
  • 2.46e3
  • 2.92e3
86.47
  • 86.47
  • 85.74
  • 83.06
AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00004784capitellum (Drosophila)
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
85.21
  • 85.21
AEIR
  • AEIR
FBbt:00004911oviduct (Drosophila)
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
84.38
  • 84.38
AEIR
  • AEIR
CL:0000025egg cell
  • FBdv:00005287unfertilized egg stage
3.09e3
  • 3.09e3
82.07
  • 82.07
AEIR
  • AEIR
FBbt:00001778wing disc (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
3.12e3
  • 3.12e3
81.90
  • 81.90
AEIR
  • AEIR
UBERON:0007023adult organism
  • FBdv:00007092day 17 of adulthood (Drosophila)
  • FBdv:00007078day 3 of adulthood (Drosophila)
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00007080day 5 of adulthood (Drosophila)
  • UBERON:0000066fully formed stage
  • FBdv:00007105day 30 of adulthood (Drosophila)
  • FBdv:00007076day 1 of adulthood (Drosophila)
3.19e3
  • 3.19e3
  • 4.57e3
  • 5.02e3
  • 5.04e3
  • 5.29e3
  • 5.36e3
  • 6.04e3
81.52
  • 81.52
  • 73.50
  • 70.91
  • 70.80
  • 69.32
  • 68.92
  • 64.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • UBERON:0000107cleavage stage
3.21e3
  • 3.21e3
81.42
  • 81.42
AEIR
  • AEIR
FBbt:00001768eye disc (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
3.21e3
  • 3.21e3
81.38
  • 81.38
AEIR
  • AEIR
FBbt:00004052thoracico-abdominal ganglion (Drosophila)
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
81.20
  • 81.20
AEIR
  • AEIR
UBERON:0000994spermathecum
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
80.84
  • 80.84
AEIR
  • AEIR
UBERON:0006868seminal fluid secreting gland
  • UBERON:0000066fully formed stage
3.42e3
  • 3.42e3
80.19
  • 80.19
AEIR
  • AEIR
UBERON:0001017central nervous system
  • FBdv:00005339third instar larval stage (Drosophila)
  • FBdv:00005355pharate adult stage P8 (Drosophila)
3.54e3
  • 3.54e3
  • 3.58e3
79.49
  • 79.49
  • 79.26
AEIR
  • AEIR
  • AEIR
UBERON:0001054Malpighian tubule
  • UBERON:0000104life cycle
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • UBERON:0000066fully formed stage
3.66e3
  • 3.66e3
  • 4.06e3
  • 4.40e3
78.81
  • 78.81
  • 76.47
  • 74.50
AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00003138adult midgut (Drosophila)
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
77.65
  • 77.65
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • FBdv:00007095day 20 of adulthood (Drosophila)
  • FBdv:00005364pharate adult stage P13 (Drosophila)
  • FBdv:00007079day 4 of adulthood (Drosophila)
  • FBdv:00007076day 1 of adulthood (Drosophila)
  • FBdv:00007085day 10 of adulthood (Drosophila)
  • UBERON:0000104life cycle
  • FBdv:00007083day 8 of adulthood (Drosophila)
  • FBdv:00007078day 3 of adulthood (Drosophila)
3.92e3
  • 3.92e3
  • 4.15e3
  • 4.16e3
  • 4.40e3
  • 4.60e3
  • 5.11e3
  • 5.20e3
  • 5.20e3
  • 5.37e3
77.29
  • 77.29
  • 75.93
  • 75.86
  • 74.51
  • 73.32
  • 70.36
  • 69.86
  • 69.86
  • 68.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000939imaginal disc
  • FBdv:00005339third instar larval stage (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
3.94e3
  • 3.94e3
  • 4.46e3
77.14
  • 77.14
  • 74.18
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • FBdv:00007005third instar larval stage L2 (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00007021third instar - cleared gut stage (Drosophila)
  • FBdv:00007020third instar - partially cleared gut stage (Drosophila)
  • FBdv:00007019third instar - uncleared gut stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
  • UBERON:0000069larval stage
  • UBERON:0004730instar larval stage
  • FBdv:00007007late third instar larval stage (Drosophila)
  • FBdv:00005337first instar larval stage (Drosophila)
  • FBdv:00005338second instar larval stage (Drosophila)
3.97e3
  • 3.97e3
  • 6.71e3
  • 6.72e3
  • 6.89e3
  • 8.28e3
  • 9.03e3
  • 1.00e4
  • 1.09e4
  • 1.12e4
  • 1.18e4
  • 1.25e4
76.97
  • 76.97
  • 61.13
  • 61.06
  • 60.08
  • 51.97
  • 47.68
  • 41.89
  • 36.81
  • 34.80
  • 31.77
  • 27.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013765digestive system element
  • FBdv:00007095day 20 of adulthood (Drosophila)
  • FBdv:00007079day 4 of adulthood (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00007076day 1 of adulthood (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
4.16e3
  • 4.16e3
  • 4.46e3
  • 4.55e3
  • 4.72e3
  • 5.22e3
75.91
  • 75.91
  • 74.17
  • 73.62
  • 72.64
  • 69.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003153head capsule
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
75.70
  • 75.70
AEIR
  • AEIR
FBbt:00003133crop (Drosophila)
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
75.38
  • 75.38
AEIR
  • AEIR
UBERON:0001045midgut
  • UBERON:0000066fully formed stage
  • UBERON:0000069larval stage
4.31e3
  • 4.31e3
  • 7.18e3
75.03
  • 75.03
  • 58.37
AEIR
  • AEIR
  • AEIR
FBbt:00003143adult hindgut (Drosophila)
  • UBERON:0000066fully formed stage
4.40e3
  • 4.40e3
74.51
  • 74.51
AEIR
  • AEIR
FBbt:00001684embryonic/larval hemocyte (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
4.45e3
  • 4.45e3
74.23
  • 74.23
AEIR
  • AEIR
UBERON:0003917arthropod fat body
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00005355pharate adult stage P8 (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • UBERON:0000066fully formed stage
  • UBERON:0000069larval stage
  • UBERON:0004730instar larval stage
  • FBdv:00005339third instar larval stage (Drosophila)
4.53e3
  • 4.53e3
  • 4.66e3
  • 4.69e3
  • 5.48e3
  • 6.51e3
  • 7.28e3
  • 8.80e3
73.77
  • 73.77
  • 72.97
  • 72.82
  • 68.21
  • 62.25
  • 57.80
  • 48.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003142prepupa
  • FBdv:00005342prepupal stage (Drosophila)
  • FBdv:00005343prepupal stage P1 (Drosophila)
4.66e3
  • 4.66e3
  • 5.37e3
73.00
  • 73.00
  • 68.89
AEIR
  • AEIR
  • AEIR
UBERON:0003143pupa
  • FBdv:00005353pupal stage P6 (Drosophila)
  • FBdv:00005348prepupal stage P4(ii) (Drosophila)
  • FBdv:00005355pharate adult stage P8 (Drosophila)
  • FBdv:00005356pharate adult stage P9 (Drosophila)
  • UBERON:0000070pupal stage
  • FBdv:00005366pharate adult stage P15 (Drosophila)
4.76e3
  • 4.76e3
  • 4.78e3
  • 4.97e3
  • 5.64e3
  • 6.00e3
  • 7.36e3
72.41
  • 72.41
  • 72.32
  • 71.18
  • 67.33
  • 65.25
  • 57.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005399male reproductive gland
  • FBdv:00007079day 4 of adulthood (Drosophila)
4.86e3
  • 4.86e3
71.83
  • 71.83
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
70.70
  • 70.70
AEIR
  • AEIR
FBbt:00004520mouthpart (Drosophila)
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
66.92
  • 66.92
AEIR
  • AEIR
UBERON:0000473testis
  • FBdv:00007079day 4 of adulthood (Drosophila)
  • UBERON:0000066fully formed stage
6.44e3
  • 6.44e3
  • 7.40e3
62.66
  • 62.66
  • 57.13
AEIR
  • AEIR
  • AEIR
UBERON:0000934ventral nerve cord
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
6.47e3
  • 6.47e3
  • 6.47e3
  • 6.47e3
  • 6.90e3
62.50
  • 62.50
  • 62.50
  • 62.50
  • 59.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001599MP1 neuron (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
8.62e3
  • 8.62e3
  • 8.62e3
  • 8.62e3
  • 8.63e3
50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000991gonad
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001882embryonic/larval midgut (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001060embryonic brain (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
49.99
  • 49.99
  • 49.99
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • FBdv:00005301embryonic stage 3 (Drosophila)
  • FBdv:00005291embryonic stage 1 (Drosophila)
  • FBdv:00005293embryonic stage 2 (Drosophila)
  • UBERON:0000092post-embryonic stage
8.63e3
  • 8.63e3
  • 8.63e3
  • 8.63e3
  • 1.03e4
49.99
  • 49.99
  • 49.99
  • 49.99
  • 40.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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