D. melanogaster Gene: scf - FBgn0025682 - Drosophila melanogaster (fruit fly)

General information

Ensembl IDFBgn0025682
Namescf
Descriptionsupercoiling factor [Source:FlyBase gene name;Acc:FBgn0025682]
OrganismDrosophila melanogaster (fruit fly)
Synonym(s)anon-est:posey14, best:ck02682, cg9148, cg9148-pa, cg9148-pb, cg9148-ra, cg9148-rb, ck02682, dcb-45, dmel\cg9148, dna supercoiling factor, fbgn0025546, fbtr0004383, fbtr0004384, q8szk6, scf, scf[+]r1.6, scf[+]r1.8

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
FBbt:00001684embryonic/larval hemocyte (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
167
  • 167
99.01637
  • 99.01637
AEIR
  • AEIR
UBERON:0003917arthropod fat body
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
  • UBERON:0004730instar larval stage
386
  • 386
  • 631
  • 869
97.71728
  • 97.71728
  • 96.26153
  • 94.84981
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005324embryonic stage 10 (Drosophila)
  • FBdv:00005331dorsal closure stage (Drosophila)
  • FBdv:00005321extended germ band stage (Drosophila)
  • UBERON:0000068embryo stage
  • FBdv:00004450late extended germ band stage (Drosophila)
  • FBdv:00005335embryonic stage 17 (Drosophila)
  • FBdv:00014201early extended germ band stage (Drosophila)
  • FBdv:00005312embryonic cycle 14 (Drosophila)
  • FBdv:00005311embryonic stage 5 (Drosophila)
  • FBdv:00005306embryonic stage 4 (Drosophila)
  • FBdv:00005309embryonic cycle 13 (Drosophila)
  • FBdv:00005293embryonic stage 2 (Drosophila)
  • FBdv:00005290pre-blastoderm stage (Drosophila)
447
  • 447
  • 497
  • 504
  • 1.06e3
  • 1.56e3
  • 2.18e3
  • 2.21e3
  • 3.41e3
  • 3.87e3
  • 3.93e3
  • 4.23e3
  • 4.80e3
  • 5.10e3
  • 5.44e3
97.35355
  • 97.35355
  • 97.05707
  • 97.01542
  • 93.73459
  • 90.75632
  • 87.09708
  • 86.92445
  • 79.77408
  • 77.05279
  • 76.68219
  • 74.93827
  • 71.51320
  • 69.73560
  • 67.71318
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • UBERON:0000066fully formed stage
695
  • 695
  • 3.11e3
95.88393
  • 95.88393
  • 81.58435
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00007005third instar larval stage L2 (Drosophila)
  • FBdv:00005338second instar larval stage (Drosophila)
  • FBdv:00005337first instar larval stage (Drosophila)
  • FBdv:00005340early third instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
  • UBERON:0004730instar larval stage
  • FBdv:00007007late third instar larval stage (Drosophila)
1.05e3
  • 1.05e3
  • 1.07e3
  • 1.14e3
  • 1.43e3
  • 2.18e3
  • 2.85e3
  • 2.93e3
  • 2.98e3
93.80250
  • 93.80250
  • 93.63336
  • 93.23059
  • 91.52257
  • 87.05652
  • 83.09661
  • 82.65722
  • 82.31985
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003142prepupa
  • FBdv:00005342prepupal stage (Drosophila)
1.17e3
  • 1.17e3
93.09169
  • 93.09169
AEIR
  • AEIR
UBERON:0000033head
  • FBdv:00007078day 3 of adulthood (Drosophila)
  • FBdv:00007085day 10 of adulthood (Drosophila)
  • UBERON:0000104life cycle
  • FBdv:00005364pharate adult stage P13 (Drosophila)
  • FBdv:00007083day 8 of adulthood (Drosophila)
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
  • 1.61e3
  • 2.02e3
  • 2.30e3
  • 2.60e3
  • 3.17e3
92.38740
  • 92.38740
  • 90.43716
  • 88.01856
  • 86.38728
  • 84.59795
  • 81.18067
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001778wing disc (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
1.31e3
  • 1.31e3
92.25133
  • 92.25133
AEIR
  • AEIR
UBERON:0003153head capsule
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
90.68489
  • 90.68489
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.78e3
  • 1.78e3
89.46271
  • 89.46271
AEIR
  • AEIR
FBbt:00004784capitellum (Drosophila)
  • UBERON:0000066fully formed stage
1.89e3
  • 1.89e3
88.80387
  • 88.80387
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
87.10500
  • 87.10500
AEIR
  • AEIR
FBbt:00001768eye disc (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
2.41e3
  • 2.41e3
85.71722
  • 85.71722
AEIR
  • AEIR
UBERON:0001054Malpighian tubule
  • FBdv:00005341wandering third instar larval stage (Drosophila)
2.49e3
  • 2.49e3
85.22976
  • 85.22976
AEIR
  • AEIR
FBbt:00004514second segment of antenna (Drosophila)
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
81.43174
  • 81.43174
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • FBdv:00005266oogenesis stage S6
3.33e3
  • 3.33e3
  • 8.14e3
80.23999
  • 80.23999
  • 51.70358
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000092post-embryonic stage
  • FBdv:00005301embryonic stage 3 (Drosophila)
  • FBdv:00005291embryonic stage 1 (Drosophila)
  • FBdv:00005293embryonic stage 2 (Drosophila)
3.54e3
  • 3.54e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
79.03956
  • 79.03956
  • 49.99407
  • 49.99110
  • 49.99110
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003199egg chamber
  • FBdv:00005286egg stage
3.61e3
  • 3.61e3
78.57762
  • 78.57762
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0000066fully formed stage
3.65e3
  • 3.65e3
78.35691
  • 78.35691
AEIR
  • AEIR
FBbt:00003023adult abdomen (Drosophila)
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
76.84318
  • 76.84318
AEIR
  • AEIR
FBbt:00003133crop (Drosophila)
  • UBERON:0000066fully formed stage
4.02e3
  • 4.02e3
76.17419
  • 76.17419
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • UBERON:0000107cleavage stage
4.07e3
  • 4.07e3
75.85404
  • 75.85404
AEIR
  • AEIR
CL:0000655secondary oocyte
  • FBdv:00005283oogenesis stage S14
4.23e3
  • 4.23e3
74.94271
  • 74.94271
AEIR
  • AEIR
FBbt:00004052thoracico-abdominal ganglion (Drosophila)
  • UBERON:0000066fully formed stage
4.23e3
  • 4.23e3
74.90195
  • 74.90195
AEIR
  • AEIR
CL:0000025egg cell
  • FBdv:00005287unfertilized egg stage
4.27e3
  • 4.27e3
74.68638
  • 74.68638
AEIR
  • AEIR
FBbt:00004911oviduct (Drosophila)
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
69.96213
  • 69.96213
AEIR
  • AEIR
FBbt:00004520mouthpart (Drosophila)
  • UBERON:0000066fully formed stage
5.13e3
  • 5.13e3
69.55569
  • 69.55569
AEIR
  • AEIR
FBbt:00003143adult hindgut (Drosophila)
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
68.68818
  • 68.68818
AEIR
  • AEIR
UBERON:0000994spermathecum
  • UBERON:0000066fully formed stage
5.54e3
  • 5.54e3
67.12277
  • 67.12277
AEIR
  • AEIR
CL:0000394plasmatocyte
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
  • 50.00297
  • 50.00297
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000395procrystal cell
  • FBdv:00005325embryonic stage 11 (Drosophila)
  • FBdv:00005327embryonic stage 12 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
AEIR
  • AEIR
  • AEIR
FBbt:00000057yolk nucleus (Drosophila)
  • FBdv:00005318embryonic stage 6 (Drosophila)
  • FBdv:00005319embryonic stage 7 (Drosophila)
  • FBdv:00005322embryonic stage 8 (Drosophila)
  • FBdv:00005323embryonic stage 9 (Drosophila)
  • FBdv:00005324embryonic stage 10 (Drosophila)
  • FBdv:00005306embryonic stage 4 (Drosophila)
  • FBdv:00005311embryonic stage 5 (Drosophila)
  • FBdv:00005325embryonic stage 11 (Drosophila)
  • FBdv:00005327embryonic stage 12 (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
  • 50.00297
  • 50.00297
  • 50.00297
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001690crystal cell (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
  • 50.00297
  • 50.00297
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001693embryonic/larval garland cell (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
  • 50.00297
  • 50.00297
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00005462garland cell primordium (Drosophila)
  • FBdv:00005325embryonic stage 11 (Drosophila)
  • FBdv:00005327embryonic stage 12 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
AEIR
  • AEIR
  • AEIR
FBbt:00005520fat body/gonad primordium (Drosophila)
  • FBdv:00005327embryonic stage 12 (Drosophila)
  • FBdv:00005325embryonic stage 11 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00000
AEIR
  • AEIR
  • AEIR
FBbt:00017006plasmatocyte primordium (Drosophila)
  • FBdv:00005323embryonic stage 9 (Drosophila)
  • FBdv:00005324embryonic stage 10 (Drosophila)
  • FBdv:00005325embryonic stage 11 (Drosophila)
  • FBdv:00005327embryonic stage 12 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
  • 50.00297
  • 50.00297
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00017007crystal cell primordium (Drosophila)
  • FBdv:00005323embryonic stage 9 (Drosophila)
  • FBdv:00005324embryonic stage 10 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
50.00297
  • 50.00297
  • 50.00297
AEIR
  • AEIR
  • AEIR
FBbt:00000127head mesoderm (Drosophila)
  • FBdv:00005319embryonic stage 7 (Drosophila)
  • FBdv:00005322embryonic stage 8 (Drosophila)
  • FBdv:00005323embryonic stage 9 (Drosophila)
  • FBdv:00005324embryonic stage 10 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00000
  • 50.00000
  • 50.00000
  • 49.99703
  • 49.99703
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00000128trunk mesoderm (Drosophila)
  • FBdv:00005319embryonic stage 7 (Drosophila)
  • FBdv:00005322embryonic stage 8 (Drosophila)
  • FBdv:00005325embryonic stage 11 (Drosophila)
  • FBdv:00005327embryonic stage 12 (Drosophila)
  • FBdv:00005323embryonic stage 9 (Drosophila)
  • FBdv:00005324embryonic stage 10 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 50.00000
  • 49.99703
  • 49.99703
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00001704embryonic/larval fat body (Drosophila)
  • FBdv:00005330embryonic stage 14 (Drosophila)
  • FBdv:00005328embryonic stage 13 (Drosophila)
  • FBdv:00005332embryonic stage 15 (Drosophila)
  • FBdv:00005334embryonic stage 16 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
  • 8.43e3
50.00000
  • 50.00000
  • 49.99703
  • 49.99703
  • 49.99703
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
FBbt:00005519visceral muscle primordium (Drosophila)
  • FBdv:00005325embryonic stage 11 (Drosophila)
  • FBdv:00005327embryonic stage 12 (Drosophila)
8.43e3
  • 8.43e3
  • 8.43e3
50.00000
  • 50.00000
  • 50.00000
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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