D. melanogaster Gene: Sdic4 - FBgn0053499 - Drosophila melanogaster (fruit fly)

General information

Ensembl IDFBgn0053499
NameSdic4
DescriptionSperm-specific dynein intermediate chain 4 [Source:FlyBase gene name;Acc:FBgn0053499]
OrganismDrosophila melanogaster (fruit fly)
Synonym(s)cg33499, dmel\cg33499, sdic:cg33499, unnamed
Orthologs(s)44 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • FBdv:00007079day 4 of adulthood (Drosophila)
2.02e3
  • 2.02e3
  • 3.54e3
88.32
  • 88.32
  • 79.47
AEIR
  • AEIR
  • AEIR
UBERON:0000939imaginal disc
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • FBdv:00005339third instar larval stage (Drosophila)
6.56e3
  • 6.56e3
  • 8.48e3
61.95
  • 61.95
  • 50.85
AEIR
  • AEIR
  • AEIR
UBERON:0005399male reproductive gland
  • FBdv:00007079day 4 of adulthood (Drosophila)
8.21e3
  • 8.21e3
52.38
  • 52.38
AEIR
  • AEIR
UBERON:0000922embryo
  • FBdv:00005304blastoderm stage (Drosophila)
  • UBERON:0000068embryo stage
8.26e3
  • 8.26e3
  • 1.51e4
52.11
  • 52.11
  • 12.40
AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • UBERON:0000066fully formed stage
  • FBdv:00007092day 17 of adulthood (Drosophila)
  • FBdv:00007078day 3 of adulthood (Drosophila)
  • FBdv:00007076day 1 of adulthood (Drosophila)
  • FBdv:00007080day 5 of adulthood (Drosophila)
  • FBdv:00007105day 30 of adulthood (Drosophila)
9.14e3
  • 9.14e3
  • 1.04e4
  • 1.16e4
  • 1.33e4
  • 1.33e4
  • 1.44e4
47.00
  • 47.00
  • 39.59
  • 32.74
  • 22.86
  • 22.73
  • 16.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006868seminal fluid secreting gland
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
44.44
  • 44.44
AEIR
  • AEIR
UBERON:0003917arthropod fat body
  • FBdv:00005343prepupal stage P1 (Drosophila)
  • FBdv:00005341wandering third instar larval stage (Drosophila)
  • UBERON:0000069larval stage
  • FBdv:00005339third instar larval stage (Drosophila)
1.08e4
  • 1.08e4
  • 1.11e4
  • 1.17e4
  • 1.55e4
37.46
  • 37.46
  • 35.60
  • 32.08
  • 9.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003143pupa
  • FBdv:00005356pharate adult stage P9 (Drosophila)
  • FBdv:00005353pupal stage P6 (Drosophila)
  • FBdv:00005355pharate adult stage P8 (Drosophila)
  • UBERON:0000070pupal stage
  • FBdv:00005366pharate adult stage P15 (Drosophila)
  • FBdv:00005348prepupal stage P4(ii) (Drosophila)
1.10e4
  • 1.10e4
  • 1.13e4
  • 1.17e4
  • 1.19e4
  • 1.22e4
  • 1.23e4
35.97
  • 35.97
  • 34.21
  • 32.43
  • 30.95
  • 29.27
  • 28.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0013765digestive system element
  • FBdv:00007076day 1 of adulthood (Drosophila)
1.31e4
  • 1.31e4
23.92
  • 23.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
melanogaster subgroup1 species1 geneCompare expression
melanogaster group2 species2 genesCompare expression
Drosophila4 species4 genesCompare expression
Ecdysozoa5 species5 genesCompare expression
Bilateria25 species44 genesCompare expression

Orthology information comes from OMA : FBgn0053499.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
melanogaster subgroup3 genesCompare expression
Drosophila4 genesCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : FBgn0053499.

Cross-references

EnsemblFBgn0053499 (Sdic4)
FlyBaseCG33499, FBgn0053499 (Sdic4)

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