Gene: Sdic4 - FBgn0053499 - Drosophila melanogaster (fruit fly)

General information

Ensembl ID	FBgn0053499
Name	Sdic4
Description	Sperm-specific dynein intermediate chain 4 [Source:FlyBase gene name;Acc:FBgn0053499]
Organism	Drosophila melanogaster (fruit fly)
Synonym(s)	cg33499, dmel\cg33499, sdic:cg33499, unnamed
Orthologs(s)	44 orthologs
Paralog(s)	6 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 2 stages UBERON:0000066fully formed stage FBdv:00007079day 4 of adulthood (Drosophila)	2.02e3 2.02e3 3.54e3	88.32 88.32 79.47	AEIR AEIR AEIR
UBERON:0000939	imaginal disc	[+] 2 stages FBdv:00005341wandering third instar larval stage (Drosophila) FBdv:00005339third instar larval stage (Drosophila)	6.56e3 6.56e3 8.48e3	61.95 61.95 50.85	AEIR AEIR AEIR
UBERON:0005399	male reproductive gland	[+] 1 stage FBdv:00007079day 4 of adulthood (Drosophila)	8.21e3 8.21e3	52.38 52.38	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages FBdv:00005304blastoderm stage (Drosophila) UBERON:0000068embryo stage	8.26e3 8.26e3 1.51e4	52.11 52.11 12.40	AEIR AEIR AEIR
UBERON:0007023	adult organism	[+] 6 stages UBERON:0000066fully formed stage FBdv:00007092day 17 of adulthood (Drosophila) FBdv:00007078day 3 of adulthood (Drosophila) FBdv:00007076day 1 of adulthood (Drosophila) FBdv:00007080day 5 of adulthood (Drosophila) FBdv:00007105day 30 of adulthood (Drosophila)	9.14e3 9.14e3 1.04e4 1.16e4 1.33e4 1.33e4 1.44e4	47.00 47.00 39.59 32.74 22.86 22.73 16.49	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0006868	seminal fluid secreting gland	[+] 1 stage UBERON:0000066fully formed stage	9.58e3 9.58e3	44.44 44.44	AEIR AEIR
UBERON:0003917	arthropod fat body	[+] 4 stages FBdv:00005343prepupal stage P1 (Drosophila) FBdv:00005341wandering third instar larval stage (Drosophila) UBERON:0000069larval stage FBdv:00005339third instar larval stage (Drosophila)	1.08e4 1.08e4 1.11e4 1.17e4 1.55e4	37.46 37.46 35.60 32.08 9.95	AEIR AEIR AEIR AEIR AEIR
UBERON:0003143	pupa	[+] 6 stages FBdv:00005356pharate adult stage P9 (Drosophila) FBdv:00005353pupal stage P6 (Drosophila) FBdv:00005355pharate adult stage P8 (Drosophila) UBERON:0000070pupal stage FBdv:00005366pharate adult stage P15 (Drosophila) FBdv:00005348prepupal stage P4(ii) (Drosophila)	1.10e4 1.10e4 1.13e4 1.17e4 1.19e4 1.22e4 1.23e4	35.97 35.97 34.21 32.43 30.95 29.27 28.48	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0013765	digestive system element	[+] 1 stage FBdv:00007076day 1 of adulthood (Drosophila)	1.31e4 1.31e4	23.92 23.92	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
melanogaster subgroup	1 species Drosophila yakuba	1 gene FBgn0232943 GE15363	Compare expression	[+]
melanogaster group	2 species Drosophila ananassae Drosophila yakuba	2 genes FBgn0097454 GF20447 FBgn0232943 GE15363	Compare expression	[+]
Drosophila	4 species Drosophila ananassae Drosophila mojavensis Drosophila virilis Drosophila yakuba	4 genes FBgn0097454 GF20447 FBgn0133855 GI11093 FBgn0202966 GJ15778 FBgn0232943 GE15363	Compare expression	[+]
Ecdysozoa	5 species Caenorhabditis elegans (nematode) Drosophila ananassae Drosophila mojavensis Drosophila virilis Drosophila yakuba	5 genes WBGene00015927 dyci-1 FBgn0097454 GF20447 FBgn0133855 GI11093 FBgn0202966 GJ15778 FBgn0232943 GE15363	Compare expression	[+]
Bilateria	25 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila virilis Drosophila yakuba	44 genes ENSG00000077380 DYNC1I2 ENSG00000158560 DYNC1I1 ENSMUSG00000027012 Dync1i2 ENSMUSG00000029757 Dync1i1 ENSDARG00000060948 dync1i1 ENSDARG00000078386 dync1i2a ENSDARG00000103195 DYNC1I2 (1 to many) WBGene00015927 dyci-1 ENSPTRG00000019422 DYNC1I1 ENSPTRG00000023476 DYNC1I2 ENSGGOG00000000228 DYNC1I1 ENSGGOG00000002696 DYNC1I2 ENSMMUG00000005915 DYNC1I1 ENSMMUG00000007301 DYNC1I2 ENSRNOG00000009700 Dync1i1 ENSRNOG00000009781 Dync1i2 ENSBTAG00000002646 DYNC1I2 ENSBTAG00000027134 DYNC1I1 ENSSSCG00000015335 DYNC1I1 ENSSSCG00000015948 DYNC1I2 ENSECAG00000007660 DYNC1I2 ENSECAG00000014203 DYNC1I1 ENSOCUG00000009944 DYNC1I2 ENSOCUG00000012213 DYNC1I1 ENSCAFG00000002143 DYNC1I1 ENSCAFG00000012696 DYNC1I2 ENSFCAG00000004593 DYNC1I2 ENSFCAG00000011808 DYNC1I1 ENSCPOG00000011054 DYNC1I1 ENSCPOG00000014814 DYNC1I2 ENSEEUG00000000497 DYNC1I1 ENSEEUG00000001131 DYNC1I2 ENSMODG00000008772 DYNC1I2 ENSOANG00000008576 DYNC1I2 ENSGALG00000009551 DYNC1I2 ENSGALG00000009722 DYNC1I1 ENSACAG00000014180 DYNC1I1 ENSACAG00000016359 DYNC1I2 ENSXETG00000020277 dync1i1 ENSXETG00000020285 dync1i2 FBgn0097454 GF20447 FBgn0133855 GI11093 FBgn0202966 GJ15778 FBgn0232943 GE15363	Compare expression	[+]

Orthology information comes from OMA : FBgn0053499.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
melanogaster subgroup	3 genes FBgn0003654 sw FBgn0052823 Sdic3 FBgn0053497 Sdic2	Compare expression	[+]
Drosophila	4 genes FBgn0003654 sw FBgn0052823 Sdic3 FBgn0053497 Sdic2 FBgn0067861 Sdic1	Compare expression	[+]
Eukaryota	6 genes FBgn0003654 sw FBgn0035256 CG13930 FBgn0052823 Sdic3 FBgn0053497 Sdic2 FBgn0067861 Sdic1 FBgn0263988 Dic61B	Compare expression	[+]

Paralogy information comes from OMA : FBgn0053499.

Cross-references

Ensembl	FBgn0053499 (Sdic4)
FlyBase	CG33499, FBgn0053499 (Sdic4)