C. elegans Gene: abl-1 - WBGene00000018 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00000018
Nameabl-1
DescriptionCaenorhabditis elegans Protein ABL-1, isoform b (abl-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_077376]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)q9u3a2, q9u3a3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
2.69e3
  • 2.69e3
92.94632
  • 92.94632
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000107cleavage stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000109gastrula stage
  • UBERON:00072322 cell stage
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
3.15e3
  • 3.15e3
  • 3.36e3
  • 7.20e3
  • 7.48e3
  • 7.91e3
  • 8.28e3
  • 8.49e3
  • 9.07e3
  • 1.19e4
  • 1.26e4
  • 1.29e4
  • 1.57e4
91.73579
  • 91.73579
  • 91.19320
  • 81.12703
  • 80.39822
  • 79.26181
  • 78.29698
  • 77.75040
  • 76.23248
  • 68.80722
  • 66.85499
  • 66.17599
  • 58.94572
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
7.03e3
  • 7.03e3
  • 7.56e3
  • 7.61e3
  • 7.63e3
  • 1.06e4
81.58482
  • 81.58482
  • 80.18923
  • 80.05398
  • 80.00624
  • 72.24934
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000068embryo stage
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
7.25e3
  • 7.25e3
  • 1.38e4
  • 1.41e4
  • 1.42e4
  • 1.45e4
  • 1.46e4
  • 1.50e4
  • 1.50e4
  • 1.59e4
  • 1.65e4
  • 1.65e4
  • 1.68e4
  • 1.76e4
  • 1.97e4
80.98415
  • 80.98415
  • 63.72206
  • 63.14546
  • 62.83506
  • 61.92977
  • 61.65615
  • 60.77088
  • 60.55804
  • 58.42968
  • 56.83805
  • 56.70254
  • 56.07828
  • 53.91689
  • 48.31344
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
80.39647
  • 80.39647
AEIR
  • AEIR
CL:0000586germ cell
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
50.00131
  • 50.00131
AEIR
  • AEIR
WBbt:0006759tail neuron (C elegans)
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
50.00131
  • 50.00131
AEIR
  • AEIR
UBERON:0000934ventral nerve cord
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
50.00000
  • 50.00000
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAJ002902, M13235, Z50806
EnsemblWBGene00000018 (abl-1)
Uniprot/SPTREMBLQ9TYI5, Q9TYI5_CAEEL
Uniprot/SWISSPROTABL1_CAEEL, P03949
WormBaseWBGene00000018

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