C. elegans Gene: cap-2 - WBGene00000293 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00000293
Namecap-2
DescriptionCaenorhabditis elegans Protein CAP-2 (cap-2) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_063935]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
550
  • 550
98.56068
  • 98.56068
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:00072322 cell stage
  • UBERON:0000068embryo stage
  • UBERON:0000106zygote stage
  • UBERON:0000107cleavage stage
  • UBERON:0000104life cycle
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
792
  • 792
  • 892
  • 908
  • 925
  • 1.14e3
  • 1.18e3
  • 1.20e3
  • 1.43e3
  • 1.45e3
  • 1.48e3
  • 1.57e3
  • 2.17e3
97.92631
  • 97.92631
  • 97.66415
  • 97.62186
  • 97.57761
  • 97.00717
  • 96.89864
  • 96.85572
  • 96.26421
  • 96.20040
  • 96.11477
  • 95.88947
  • 94.30324
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
906
  • 906
  • 1.34e3
  • 1.44e3
  • 1.51e3
  • 2.06e3
97.62805
  • 97.62805
  • 96.48193
  • 96.22989
  • 96.05647
  • 94.61118
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000068embryo stage
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
1.26e3
  • 1.26e3
  • 1.35e3
  • 1.37e3
  • 1.97e3
  • 2.06e3
  • 2.13e3
  • 2.16e3
  • 2.25e3
  • 2.36e3
  • 2.46e3
  • 2.57e3
  • 2.61e3
  • 2.76e3
  • 2.91e3
96.69855
  • 96.69855
  • 96.45118
  • 96.40622
  • 94.82908
  • 94.59967
  • 94.43091
  • 94.35185
  • 94.09189
  • 93.81893
  • 93.54746
  • 93.26023
  • 93.16887
  • 92.76402
  • 92.36456
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
2.44e3
  • 2.44e3
  • 3.00e3
93.61523
  • 93.61523
  • 92.13501
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLZ18806, Z18854, Z46935
EnsemblWBGene00000293 (cap-2)
Uniprot/SWISSPROTCAPZB_CAEEL, P34686
WormBaseWBGene00000293

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