C. elegans Gene: chd-3 - WBGene00000482 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00000482
Namechd-3
DescriptionCaenorhabditis elegans Protein CHD-3 (chd-3) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_077739]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)q18794

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000107cleavage stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:00072322 cell stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
1.32e3
  • 1.32e3
  • 2.36e3
  • 2.70e3
  • 3.46e3
  • 4.67e3
  • 5.23e3
  • 5.40e3
  • 6.10e3
  • 6.16e3
  • 9.70e3
  • 1.04e4
  • 1.13e4
  • 1.15e4
96.55884
  • 96.55884
  • 93.83646
  • 92.95931
  • 90.96336
  • 87.80121
  • 86.33140
  • 85.90410
  • 84.07942
  • 83.91107
  • 74.66728
  • 72.84828
  • 70.38898
  • 69.97035
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000068embryo stage
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
1.80e3
  • 1.80e3
  • 6.22e3
  • 6.39e3
  • 8.17e3
  • 8.47e3
  • 8.55e3
  • 8.81e3
  • 1.02e4
  • 1.05e4
  • 1.06e4
  • 1.11e4
  • 1.13e4
  • 1.19e4
  • 1.44e4
95.29212
  • 95.29212
  • 83.73998
  • 83.31596
  • 78.66620
  • 77.87173
  • 77.67786
  • 76.98451
  • 73.28297
  • 72.61692
  • 72.33936
  • 71.12661
  • 70.55774
  • 68.85149
  • 62.47908
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
2.66e3
  • 2.66e3
93.04487
  • 93.04487
AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
  • 6.75e3
  • 7.04e3
  • 7.07e3
  • 9.15e3
83.33068
  • 83.33068
  • 82.37628
  • 81.61419
  • 81.52993
  • 76.10466
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.33e4
71.80067
  • 71.80067
  • 65.36325
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLAF308444, Z67881, Z67884
EnsemblWBGene00000482 (chd-3)
Uniprot/SWISSPROTCHD3_CAEEL, Q22516
WormBaseWBGene00000482

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