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C. elegans Gene: cul-6 - WBGene00000841 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00000841
Namecul-6
DescriptionCaenorhabditis elegans Protein CUL-6 (cul-6) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_070011]
OrganismCaenorhabditis elegans (nematode)
Orthologs(s)27 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
7.12e3
  • 7.12e3
81.34
  • 81.34
AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
9.32e3
  • 9.32e3
  • 1.14e4
  • 1.21e4
  • 1.25e4
  • 1.33e4
75.58
  • 75.58
  • 70.18
  • 68.40
  • 67.16
  • 65.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000107cleavage stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
  • 1.21e4
  • 1.75e4
  • 1.77e4
  • 1.95e4
  • 2.17e4
  • 2.43e4
  • 2.51e4
70.47
  • 70.47
  • 68.25
  • 54.09
  • 53.53
  • 48.80
  • 43.07
  • 36.42
  • 34.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Ecdysozoa6 species6 genesCompare expression
Bilateria25 species27 genesCompare expression

Orthology information comes from OMA : WBGene00000841.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : WBGene00000841.

Cross-references

EnsemblWBGene00000841 (cul-6)
WormBaseWBGene00000841
EMBLZ77666
Uniprot/SWISSPROTCUL6_CAEEL, Q21346

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