C. elegans Gene: cyn-2 - WBGene00000878 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00000878
Namecyn-2
DescriptionCaenorhabditis elegans Protein CYN-2 (cyn-2) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_067427]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)o46022

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000106zygote stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:00072322 cell stage
  • UBERON:0000109gastrula stage
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000107cleavage stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000068embryo stage
2.15e3
  • 2.15e3
  • 3.77e3
  • 5.55e3
  • 6.34e3
  • 7.05e3
  • 7.43e3
  • 8.61e3
  • 1.29e4
  • 1.38e4
  • 1.77e4
  • 1.78e4
  • 1.80e4
  • 2.44e4
94.38051
  • 94.38051
  • 90.15623
  • 85.50323
  • 83.43413
  • 81.58931
  • 80.58912
  • 77.49796
  • 66.28586
  • 63.97884
  • 53.82070
  • 53.43097
  • 53.04691
  • 36.32722
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
3.51e3
  • 3.51e3
  • 4.52e3
  • 5.83e3
  • 6.54e3
  • 7.58e3
  • 1.16e4
  • 1.21e4
  • 1.23e4
  • 1.25e4
  • 1.35e4
  • 1.41e4
  • 1.43e4
  • 1.44e4
  • 2.01e4
90.83339
  • 90.83339
  • 88.19725
  • 84.78069
  • 82.92524
  • 80.20069
  • 69.61834
  • 68.41022
  • 67.84320
  • 67.34680
  • 64.72932
  • 63.04393
  • 62.67634
  • 62.41450
  • 47.45257
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
5.45e3
  • 5.45e3
  • 8.44e3
  • 8.98e3
  • 9.68e3
  • 9.68e3
85.76448
  • 85.76448
  • 77.94728
  • 76.54293
  • 74.70383
  • 74.70101
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
1.25e4
  • 1.25e4
67.45691
  • 67.45691
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLU34354, Z92822
EnsemblWBGene00000878 (cyn-2)
Uniprot/SWISSPROTCYP2_CAEEL, P52010
WormBaseWBGene00000878

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