C. elegans Gene: dnj-17 - WBGene00001035 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00001035
Namednj-17
DescriptionCaenorhabditis elegans Protein DNJ-17 (dnj-17) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_067358]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000465material anatomical entity
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • WBls:0000024L1 larva Ce (C elegans)
1.83e3
  • 1.83e3
  • 2.35e3
  • 2.50e3
  • 3.32e3
  • 3.58e3
  • 3.79e3
  • 3.81e3
  • 4.36e3
  • 4.81e3
  • 4.93e3
  • 5.38e3
  • 5.56e3
  • 5.97e3
  • 7.38e3
95.19283
  • 95.19283
  • 93.84417
  • 93.44139
  • 91.30682
  • 90.62109
  • 90.07569
  • 90.01067
  • 88.56970
  • 87.39635
  • 87.07489
  • 85.90227
  • 85.43725
  • 84.35851
  • 80.65771
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
2.49e3
  • 2.49e3
  • 4.34e3
93.46370
  • 93.46370
  • 88.62444
AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
  • 3.99e3
  • 4.42e3
  • 4.71e3
  • 6.67e3
89.55558
  • 89.55558
  • 89.54235
  • 88.42512
  • 87.65945
  • 82.51187
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000107cleavage stage
  • UBERON:00072322 cell stage
  • UBERON:0000109gastrula stage
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000106zygote stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • WBls:0000024L1 larva Ce (C elegans)
4.20e3
  • 4.20e3
  • 5.64e3
  • 6.01e3
  • 6.24e3
  • 6.69e3
  • 6.77e3
  • 7.21e3
  • 7.32e3
  • 7.42e3
  • 8.24e3
  • 1.16e4
  • 1.36e4
88.99742
  • 88.99742
  • 85.22508
  • 84.24675
  • 83.63748
  • 82.46667
  • 82.25957
  • 81.09033
  • 80.80457
  • 80.56228
  • 78.39935
  • 69.72041
  • 64.43697
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
9.58e3
  • 9.58e3
74.88118
  • 74.88118
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLZ81113
EnsemblWBGene00001035 (dnj-17)
Uniprot/SPTREMBLO62360, O62360_CAEEL
WormBaseWBGene00001035

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