C. elegans Gene: dpy-20 - WBGene00001079 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00001079
Namedpy-20
DescriptionCaenorhabditis elegans Protein DPY-20 (dpy-20) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_069814]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000104life cycle
6.40e3
  • 6.40e3
  • 8.20e3
  • 1.60e4
  • 2.35e4
  • 2.81e4
83.21
  • 83.21
  • 78.50
  • 58.00
  • 38.28
  • 26.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
6.97e3
  • 6.97e3
  • 1.29e4
  • 1.53e4
  • 1.93e4
  • 2.16e4
  • 2.18e4
  • 2.21e4
  • 2.24e4
  • 2.25e4
  • 2.27e4
81.74
  • 81.74
  • 66.20
  • 59.90
  • 49.45
  • 43.35
  • 42.93
  • 41.97
  • 41.19
  • 41.14
  • 40.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
  • 1.80e4
  • 1.80e4
  • 1.92e4
57.61
  • 57.61
  • 52.90
  • 52.73
  • 49.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLU01918, Z68300
EnsemblWBGene00001079 (dpy-20)
Uniprot/SWISSPROTDPY20_CAEEL, P34807
WormBaseWBGene00001079

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