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C. elegans Gene: eat-4 - WBGene00001135 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00001135
Nameeat-4
DescriptionCaenorhabditis elegans Protein EAT-4 (eat-4) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_066622]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)q9tzn7
Orthologs(s)64 orthologs
Paralog(s)26 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000107cleavage stage
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000109gastrula stage
  • UBERON:0000068embryo stage
9.06e3
  • 9.06e3
  • 1.03e4
  • 1.06e4
  • 1.09e4
  • 1.30e4
  • 1.31e4
  • 1.63e4
  • 1.68e4
  • 1.76e4
  • 2.75e4
  • 2.87e4
76.25
  • 76.25
  • 72.89
  • 72.27
  • 71.31
  • 65.94
  • 65.75
  • 57.37
  • 55.84
  • 53.89
  • 27.92
  • 24.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
1.03e4
  • 1.03e4
72.96
  • 72.96
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
1.13e4
  • 1.13e4
  • 1.73e4
  • 1.81e4
  • 1.93e4
  • 2.01e4
  • 2.03e4
  • 2.10e4
  • 2.12e4
  • 2.21e4
  • 2.25e4
  • 2.25e4
  • 2.25e4
  • 2.29e4
70.38
  • 70.38
  • 54.74
  • 52.54
  • 49.29
  • 47.25
  • 46.72
  • 44.87
  • 44.52
  • 41.97
  • 41.14
  • 41.04
  • 40.98
  • 39.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • UBERON:0000066fully formed stage
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
1.40e4
  • 1.40e4
  • 1.43e4
  • 1.43e4
  • 1.46e4
  • 1.60e4
63.37
  • 63.37
  • 62.59
  • 62.56
  • 61.86
  • 57.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Ecdysozoa6 species6 genesCompare expression
Bilateria26 species64 genesCompare expression

Orthology information comes from OMA : WBGene00001135.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eumetazoa1 geneCompare expression
Eukaryota26 genesCompare expression

Paralogy information comes from OMA : WBGene00001135.

Cross-references

EnsemblWBGene00001135 (eat-4)
WormBaseWBGene00001135
EMBLAF095787, Z22177
Uniprot/SPTREMBLS6DQ91, S6DQ91_CAEEL
Uniprot/SWISSPROTEAT4_CAEEL, P34644

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