C. elegans Gene: gas-1 - WBGene00001520 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00001520
Namegas-1
DescriptionCaenorhabditis elegans Protein GAS-1 (gas-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_078168]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000465material anatomical entity
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
464
  • 464
  • 1.11e3
  • 1.14e3
  • 1.16e3
  • 1.18e3
  • 1.19e3
  • 1.21e3
  • 1.52e3
  • 1.87e3
  • 2.13e3
  • 2.21e3
  • 3.58e3
  • 3.69e3
  • 3.95e3
98.78509
  • 98.78509
  • 97.10018
  • 97.00122
  • 96.97403
  • 96.89719
  • 96.88319
  • 96.83359
  • 96.00876
  • 95.09796
  • 94.42441
  • 94.21366
  • 90.61920
  • 90.33161
  • 89.65227
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • UBERON:0000107cleavage stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000106zygote stage
  • UBERON:0000109gastrula stage
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:00072322 cell stage
  • UBERON:0000068embryo stage
657
  • 657
  • 662
  • 1.23e3
  • 1.82e3
  • 2.02e3
  • 2.64e3
  • 2.73e3
  • 3.11e3
  • 3.17e3
  • 3.42e3
  • 3.62e3
  • 6.59e3
98.28022
  • 98.28022
  • 98.26832
  • 96.76852
  • 95.22605
  • 94.70173
  • 93.09130
  • 92.85611
  • 91.84155
  • 91.69212
  • 91.03438
  • 90.52104
  • 82.73437
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
882
  • 882
97.68968
  • 97.68968
AEIR
  • AEIR
UBERON:0007023adult organism
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
2.20e3
  • 2.20e3
  • 2.37e3
  • 4.36e3
  • 4.87e3
  • 4.97e3
94.23256
  • 94.23256
  • 93.78521
  • 88.56286
  • 87.24744
  • 86.98452
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
6.29e3
  • 6.29e3
  • 6.87e3
83.52302
  • 83.52302
  • 81.99898
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLZ79601
EnsemblWBGene00001520 (gas-1)
Uniprot/SWISSPROTNDUS2_CAEEL, Q93873
WormBaseWBGene00001520

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