We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

C. elegans Gene: gpd-4 - WBGene00001686 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00001686
Namegpd-4
DescriptionCaenorhabditis elegans Protein GPD-4 (gpd-4) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_063791]
OrganismCaenorhabditis elegans (nematode)
Orthologs(s)77 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • UBERON:0000109gastrula stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000107cleavage stage
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
178
  • 178
  • 252
  • 380
  • 382
  • 1.22e3
  • 1.54e3
  • 1.54e3
  • 2.74e3
  • 3.59e3
  • 5.44e3
  • 5.62e3
  • 2.06e4
99.54
  • 99.54
  • 99.34
  • 99.01
  • 99.00
  • 96.79
  • 95.98
  • 95.96
  • 92.83
  • 90.58
  • 85.73
  • 85.26
  • 46.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
254
  • 254
  • 355
99.34
  • 99.34
  • 99.07
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
490
  • 490
  • 774
  • 894
  • 1.00e3
  • 1.24e3
  • 1.31e3
  • 2.96e3
  • 2.97e3
  • 3.20e3
  • 3.38e3
  • 5.70e3
  • 6.10e3
  • 8.97e3
  • 9.59e3
98.72
  • 98.72
  • 97.97
  • 97.66
  • 97.38
  • 96.76
  • 96.58
  • 92.25
  • 92.22
  • 91.62
  • 91.13
  • 85.05
  • 84.02
  • 76.48
  • 74.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
499
  • 499
  • 587
  • 833
  • 1.44e3
  • 1.55e3
98.69
  • 98.69
  • 98.46
  • 97.82
  • 96.23
  • 95.93
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
5.90e3
  • 5.90e3
84.55
  • 84.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Ecdysozoa5 species7 genesCompare expression
Bilateria24 species77 genesCompare expression

Orthology information comes from OMA : WBGene00001686.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Caenorhabditis1 geneCompare expression

Paralogy information comes from OMA : WBGene00001686.

Cross-references

EnsemblWBGene00001686 (gpd-4)
WormBaseWBGene00001686
EMBLX52673, Z48783
Uniprot/SWISSPROTG3P4_CAEEL, P17331

Do not show this banner again