C. elegans Gene: jkk-1 - WBGene00002177 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00002177
Namejkk-1
DescriptionCaenorhabditis elegans Protein JKK-1 (jkk-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_076512]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
8.54e3
  • 8.54e3
77.60306
  • 77.60306
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000107cleavage stage
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000068embryo stage
1.17e4
  • 1.17e4
  • 1.42e4
  • 1.44e4
  • 1.54e4
  • 1.64e4
  • 1.76e4
  • 1.90e4
  • 2.06e4
69.37330
  • 69.37330
  • 62.72996
  • 62.24620
  • 59.71577
  • 57.12449
  • 53.77577
  • 50.11076
  • 46.08148
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000068embryo stage
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
1.35e4
  • 1.35e4
  • 1.41e4
  • 1.84e4
  • 1.92e4
  • 2.03e4
  • 2.08e4
  • 2.10e4
  • 2.17e4
  • 2.21e4
  • 2.25e4
  • 2.25e4
  • 2.29e4
64.48744
  • 64.48744
  • 63.05509
  • 51.89002
  • 49.74295
  • 46.70500
  • 45.59473
  • 44.83747
  • 43.19535
  • 41.96972
  • 41.13836
  • 41.03719
  • 39.95986
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
  • 1.60e4
  • 1.62e4
  • 1.64e4
  • 1.73e4
58.91887
  • 58.91887
  • 58.02302
  • 57.60728
  • 57.11460
  • 54.53609
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLAB024086, FO080312
EnsemblWBGene00002177 (jkk-1)
Uniprot/SPTREMBLG5EDT6, JKK1_CAEEL
WormBaseWBGene00002177

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