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C. elegans Gene: myo-2 - WBGene00003514 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00003514
Namemyo-2
DescriptionCaenorhabditis elegans Protein MYO-2 (myo-2) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_077691]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)q20439, q22545
Orthologs(s)173 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000107cleavage stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000106zygote stage
  • UBERON:0000109gastrula stage
  • UBERON:00072322 cell stage
  • UBERON:0000068embryo stage
730
  • 730
  • 1.37e3
  • 1.64e3
  • 3.22e3
  • 3.52e3
  • 5.25e3
  • 5.35e3
  • 8.39e3
  • 9.28e3
  • 1.26e4
  • 1.83e4
  • 2.94e4
98.09
  • 98.09
  • 96.42
  • 95.71
  • 91.57
  • 90.78
  • 86.24
  • 85.98
  • 78.02
  • 75.68
  • 67.00
  • 52.15
  • 22.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.14e3
  • 1.14e3
  • 5.81e3
  • 6.71e3
  • 9.43e3
  • 1.08e4
  • 1.12e4
  • 1.12e4
  • 1.22e4
  • 1.24e4
  • 1.46e4
  • 1.46e4
  • 1.51e4
  • 1.72e4
97.02
  • 97.02
  • 84.78
  • 82.42
  • 75.27
  • 71.70
  • 70.67
  • 70.61
  • 68.01
  • 67.52
  • 61.72
  • 61.68
  • 60.45
  • 54.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
4.91e3
  • 4.91e3
87.13
  • 87.13
AEIR
  • AEIR
UBERON:0007023adult organism
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
6.16e3
  • 6.16e3
  • 6.31e3
  • 7.59e3
  • 8.80e3
  • 8.88e3
83.86
  • 83.86
  • 83.46
  • 80.10
  • 76.94
  • 76.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria20 species173 genesCompare expression

Orthology information comes from OMA : WBGene00003514.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria4 genesCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : WBGene00003514.

Cross-references

EnsemblWBGene00003514 (myo-2)
WormBaseWBGene00003514
EMBLM37233, M37235, M37236, X08066, Z68117, Z68119
Uniprot/SWISSPROTMYO2_CAEEL, P12845

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