C. elegans Gene: rbg-2 - WBGene00004318 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00004318
Namerbg-2
DescriptionCaenorhabditis elegans Protein RBG-2, isoform a (rbg-2) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_001026460]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)q7jlf2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000107cleavage stage
  • UBERON:0000109gastrula stage
  • UBERON:00072322 cell stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000106zygote stage
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000068embryo stage
5.05e3
  • 5.05e3
  • 5.72e3
  • 5.76e3
  • 6.71e3
  • 6.83e3
  • 7.63e3
  • 7.66e3
  • 8.15e3
  • 9.14e3
  • 1.07e4
  • 1.35e4
  • 1.37e4
86.76721
  • 86.76721
  • 85.00177
  • 84.89048
  • 82.40611
  • 82.10489
  • 79.99599
  • 79.92371
  • 78.63388
  • 76.05421
  • 72.03267
  • 64.65388
  • 63.97051
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
  • 5.57e3
  • 5.63e3
  • 5.68e3
  • 6.81e3
85.68918
  • 85.68918
  • 85.39527
  • 85.24262
  • 85.11770
  • 82.15989
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
5.98e3
  • 5.98e3
84.33239
  • 84.33239
AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
7.14e3
  • 7.14e3
  • 1.19e4
81.28614
  • 81.28614
  • 68.69242
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • UBERON:0000068embryo stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
7.70e3
  • 7.70e3
  • 9.38e3
  • 9.51e3
  • 9.97e3
  • 1.02e4
  • 1.12e4
  • 1.14e4
  • 1.17e4
  • 1.17e4
  • 1.28e4
  • 1.31e4
  • 1.32e4
  • 1.47e4
  • 1.50e4
79.82467
  • 79.82467
  • 75.39999
  • 75.06689
  • 73.85888
  • 73.17524
  • 70.64686
  • 70.05956
  • 69.45893
  • 69.34321
  • 66.31876
  • 65.74075
  • 65.50431
  • 61.51259
  • 60.66932
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLZ75550
EnsemblWBGene00004318 (rbg-2)
Uniprot/SWISSPROTQ22670, RBGPR_CAEEL
WormBaseWBGene00004318

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