C. elegans Gene: zif-1 - WBGene00006977 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00006977
Namezif-1
DescriptionCaenorhabditis elegans Protein ZIF-1 (zif-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_066591]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • UBERON:0000107cleavage stage
  • UBERON:0000109gastrula stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
1.03e3
  • 1.03e3
  • 1.28e3
  • 1.79e3
  • 2.03e3
  • 2.35e3
  • 2.44e3
  • 5.40e3
  • 5.63e3
  • 8.27e3
  • 1.03e4
  • 1.12e4
  • 1.12e4
  • 2.11e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
  • 1.33e3
  • 1.58e3
  • 1.95e3
  • 4.68e3
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
5.38e3
  • 5.38e3
  • 7.42e3
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • UBERON:0000068embryo stage
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
6.97e3
  • 6.97e3
  • 7.01e3
  • 7.03e3
  • 7.73e3
  • 8.87e3
  • 9.06e3
  • 9.12e3
  • 1.11e4
  • 1.15e4
  • 1.16e4
  • 1.23e4
  • 1.43e4
  • 1.74e4
  • 1.77e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
1.42e4
  • 1.42e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLAY547284, Z11505
EnsemblWBGene00006977 (zif-1)
Uniprot/SWISSPROTP34482, ZIF1_CAEEL
WormBaseWBGene00006977

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