C. elegans Gene: trx-2 - WBGene00007099 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00007099
Nametrx-2
DescriptionCaenorhabditis elegans Protein TRX-2, isoform a [Source:RefSeq mRNA;Acc:NM_001269278]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000465material anatomical entity
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
376
  • 376
  • 424
  • 452
  • 703
  • 724
  • 1.01e3
  • 1.09e3
  • 1.15e3
  • 1.23e3
  • 1.28e3
  • 1.65e3
  • 1.68e3
  • 2.05e3
  • 2.80e3
99.02002
  • 99.02002
  • 98.89504
  • 98.82153
  • 98.16681
  • 98.11144
  • 97.36295
  • 97.16116
  • 96.99343
  • 96.78209
  • 96.67029
  • 95.69075
  • 95.60763
  • 94.64416
  • 92.69008
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
536
  • 536
  • 1.18e3
98.60265
  • 98.60265
  • 96.93055
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:00072322 cell stage
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • UBERON:0000106zygote stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000068embryo stage
  • UBERON:0000107cleavage stage
2.55e3
  • 2.55e3
  • 2.63e3
  • 2.75e3
  • 2.81e3
  • 2.84e3
  • 2.87e3
  • 2.93e3
  • 3.50e3
  • 3.59e3
  • 4.49e3
  • 4.51e3
  • 6.93e3
  • 7.72e3
93.33966
  • 93.33966
  • 93.14151
  • 92.81021
  • 92.66410
  • 92.59617
  • 92.49951
  • 92.34799
  • 90.85886
  • 90.61587
  • 88.26619
  • 88.22726
  • 81.89738
  • 79.84100
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
2.69e3
  • 2.69e3
  • 2.91e3
  • 3.08e3
  • 3.26e3
  • 3.55e3
92.96736
  • 92.96736
  • 92.41011
  • 91.95405
  • 91.47559
  • 90.71664
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
5.38e3
  • 5.38e3
85.95015
  • 85.95015
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLZ71178
EnsemblWBGene00007099 (trx-2)
Uniprot/SPTREMBLG3MU08, G3MU08_CAEEL
Uniprot/SWISSPROTQ17424, THIO2_CAEEL
WormBaseWBGene00007099

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