C. elegans Gene: lipl-1 - WBGene00010062 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00010062
Namelipl-1
DescriptionCaenorhabditis elegans Protein LIPL-1 (lipl-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_073828]
OrganismCaenorhabditis elegans (nematode)
Orthologs(s)95 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007023adult organism
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
3.64e3
  • 3.64e3
  • 5.21e3
  • 9.47e3
  • 1.09e4
  • 1.27e4
90.45
  • 90.45
  • 86.34
  • 75.18
  • 71.48
  • 66.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000024L1 larva Ce (C elegans)
5.70e3
  • 5.70e3
  • 5.97e3
  • 8.37e3
  • 9.80e3
  • 1.28e4
85.06
  • 85.06
  • 84.35
  • 78.07
  • 74.30
  • 66.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
5.97e3
  • 5.97e3
  • 7.87e3
  • 8.00e3
  • 9.36e3
  • 9.98e3
  • 1.04e4
  • 1.22e4
  • 1.29e4
  • 1.35e4
  • 1.60e4
  • 1.61e4
  • 1.77e4
84.35
  • 84.35
  • 79.37
  • 79.02
  • 75.45
  • 73.84
  • 72.86
  • 68.05
  • 66.06
  • 64.68
  • 57.99
  • 57.71
  • 53.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria20 species95 genesCompare expression

Orthology information comes from OMA : WBGene00010062.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression
Eumetazoa3 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : WBGene00010062.

Cross-references

EnsemblWBGene00010062 (lipl-1)
WormBaseWBGene00010062
EMBLZ79696
Uniprot/SPTREMBLQ93789, Q93789_CAEEL

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