C. elegans Gene: cchl-1 - WBGene00011527 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00011527
Namecchl-1
DescriptionCaenorhabditis elegans Protein CCHL-1 (cchl-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_064002]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
519
  • 519
  • 1.01e3
98.64636
  • 98.64636
  • 97.35445
AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
905
  • 905
  • 954
  • 1.05e3
  • 1.12e3
  • 1.53e3
97.63783
  • 97.63783
  • 97.51136
  • 97.27216
  • 97.06577
  • 96.01194
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000109gastrula stage
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000107cleavage stage
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:0000024L1 larva Ce (C elegans)
955
  • 955
  • 1.06e3
  • 1.30e3
  • 1.39e3
  • 1.42e3
  • 1.45e3
  • 1.79e3
  • 2.12e3
  • 2.12e3
  • 2.18e3
  • 2.76e3
  • 3.23e3
  • 3.91e3
97.50767
  • 97.50767
  • 97.24556
  • 96.61681
  • 96.36601
  • 96.28455
  • 96.22494
  • 95.31579
  • 94.47041
  • 94.46722
  • 94.31018
  • 92.78814
  • 91.56269
  • 89.79643
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
1.03e3
  • 1.03e3
  • 1.70e3
  • 1.86e3
  • 2.18e3
  • 2.20e3
  • 2.22e3
  • 2.27e3
  • 2.61e3
  • 2.84e3
  • 3.15e3
  • 3.36e3
  • 3.95e3
  • 3.96e3
  • 4.07e3
97.32477
  • 97.32477
  • 95.55987
  • 95.15426
  • 94.30637
  • 94.24889
  • 94.21566
  • 94.07939
  • 93.18227
  • 92.57475
  • 91.76615
  • 91.23399
  • 89.67656
  • 89.65397
  • 89.36634
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
1.22e3
  • 1.22e3
96.81395
  • 96.81395
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLZ49130
EnsemblWBGene00011527 (cchl-1)
Uniprot/SWISSPROTCCHL_CAEEL, P53703
WormBaseWBGene00011527

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