C. elegans Gene: T08A11.2 - WBGene00011605 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00011605
NameT08A11.2
DescriptionCaenorhabditis elegans Protein T08A11.2 (T08A11.2) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_065452]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000107cleavage stage
  • UBERON:0000109gastrula stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:00072322 cell stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
1.32e3
  • 1.32e3
  • 2.45e3
  • 2.94e3
  • 3.01e3
  • 3.32e3
  • 3.64e3
  • 4.01e3
  • 4.06e3
  • 4.14e3
  • 5.19e3
  • 6.03e3
  • 6.72e3
  • 1.32e4
96.55463
  • 96.55463
  • 93.59676
  • 92.32186
  • 92.13966
  • 91.33663
  • 90.49833
  • 89.53955
  • 89.39322
  • 89.18425
  • 86.45188
  • 84.25890
  • 82.43908
  • 65.42982
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
2.85e3
  • 2.85e3
  • 3.31e3
  • 3.41e3
  • 3.49e3
  • 4.15e3
92.54646
  • 92.54646
  • 91.35338
  • 91.08257
  • 90.89418
  • 89.15535
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
3.62e3
  • 3.62e3
90.53598
  • 90.53598
AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
  • 5.59e3
88.66700
  • 88.66700
  • 85.40910
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000068embryo stage
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
4.42e3
  • 4.42e3
  • 6.34e3
  • 6.69e3
  • 6.80e3
  • 7.11e3
  • 7.54e3
  • 7.56e3
  • 7.62e3
  • 7.66e3
  • 7.78e3
  • 8.03e3
  • 8.12e3
  • 8.53e3
  • 8.59e3
88.45273
  • 88.45273
  • 83.44171
  • 82.52605
  • 82.22498
  • 81.42629
  • 80.29691
  • 80.25864
  • 80.09222
  • 80.00311
  • 79.67376
  • 79.01937
  • 78.77936
  • 77.71229
  • 77.56285
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLZ50874, Z50875
EnsemblWBGene00011605 (T08A11.2)
Uniprot/SPTREMBLG5EEQ8, G5EEQ8_CAEEL
WormBaseWBGene00011605

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