C. elegans Gene: cacn-1 - WBGene00012230 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00012230
Namecacn-1
DescriptionCaenorhabditis elegans Protein CACN-1, isoform a (cacn-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_001267493]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)e5qci6, e5qci7

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
  • 2.46e3
  • 3.30e3
  • 3.60e3
  • 5.05e3
94.02952
  • 94.02952
  • 93.57735
  • 91.39327
  • 90.58645
  • 86.82192
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000107cleavage stage
  • UBERON:0000068embryo stage
  • UBERON:0000109gastrula stage
  • UBERON:00072322 cell stage
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000106zygote stage
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
2.98e3
  • 2.98e3
  • 4.23e3
  • 4.59e3
  • 4.98e3
  • 5.09e3
  • 5.19e3
  • 5.40e3
  • 5.56e3
  • 6.03e3
  • 6.33e3
  • 6.94e3
  • 7.68e3
  • 1.80e4
92.22501
  • 92.22501
  • 88.94771
  • 88.00601
  • 87.00088
  • 86.69260
  • 86.45680
  • 85.89772
  • 85.48756
  • 84.24244
  • 83.46015
  • 81.86081
  • 79.94644
  • 53.02849
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
6.17e3
  • 6.17e3
83.89012
  • 83.89012
AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
7.45e3
  • 7.45e3
  • 7.65e3
  • 1.28e4
80.53338
  • 80.53338
  • 80.03004
  • 66.66666
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
8.08e3
  • 8.08e3
  • 9.27e3
  • 9.71e3
  • 1.04e4
  • 1.05e4
  • 1.08e4
  • 1.14e4
  • 1.16e4
  • 1.19e4
  • 1.24e4
  • 1.29e4
  • 1.29e4
  • 1.36e4
  • 1.73e4
78.88389
  • 78.88389
  • 75.78139
  • 74.62266
  • 72.85823
  • 72.65036
  • 71.75782
  • 70.11202
  • 69.69092
  • 68.90170
  • 67.60342
  • 66.42197
  • 66.21100
  • 64.53220
  • 54.87168
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005828gonadal sheath cell (C elegans)
  • UBERON:0000104life cycle
1.91e4
  • 1.91e4
50.00131
  • 50.00131
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLZ82067, Z83234
EnsemblWBGene00012230 (cacn-1)
Uniprot/SWISSPROTCATIN_CAEEL, G5EG14
WormBaseWBGene00012230

Do not show this banner again