C. elegans Gene: Y39E4A.3 - WBGene00012713 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00012713
NameY39E4A.3
DescriptionCaenorhabditis elegans Protein Y39E4A.3, isoform a (Y39E4A.3) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_001038287]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • UBERON:0000104life cycle
  • UBERON:0000107cleavage stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:0000024L1 larva Ce (C elegans)
1.44e3
  • 1.44e3
  • 1.63e3
  • 1.76e3
  • 1.85e3
  • 2.21e3
  • 2.56e3
  • 3.07e3
  • 3.31e3
  • 3.41e3
  • 4.99e3
  • 5.84e3
  • 9.95e3
  • 1.04e4
96.24427
  • 96.24427
  • 95.74424
  • 95.41767
  • 95.17220
  • 94.23160
  • 93.30301
  • 91.99268
  • 91.34740
  • 91.08252
  • 86.97015
  • 84.73424
  • 74.01014
  • 72.73239
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
1.68e3
  • 1.68e3
  • 5.01e3
95.62524
  • 95.62524
  • 86.90319
AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
2.10e3
  • 2.10e3
  • 2.38e3
  • 3.05e3
  • 3.78e3
  • 3.80e3
94.50677
  • 94.50677
  • 93.78214
  • 92.04582
  • 90.12950
  • 90.07224
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
3.45e3
  • 3.45e3
  • 3.97e3
  • 3.98e3
  • 4.02e3
  • 4.52e3
  • 4.54e3
  • 4.67e3
  • 5.00e3
  • 5.52e3
  • 6.08e3
  • 6.78e3
  • 7.02e3
  • 8.91e3
  • 9.32e3
90.99705
  • 90.99705
  • 89.62051
  • 89.60079
  • 89.49681
  • 88.20068
  • 88.13038
  • 87.80155
  • 86.94784
  • 85.58989
  • 84.11584
  • 82.28519
  • 81.65512
  • 76.71465
  • 75.65651
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
3.76e3
  • 3.76e3
90.17553
  • 90.17553
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLAL021480
EnsemblWBGene00012713 (Y39E4A.3)
Uniprot/SPTREMBLQ4A1S8, Q4A1S8_CAEEL
Uniprot/SWISSPROTO45924, ODBA_CAEEL
WormBaseWBGene00012713

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