C. elegans Gene: Y53C10A.5 - WBGene00013136 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00013136
NameY53C10A.5
DescriptionCaenorhabditis elegans Protein Y53C10A.5 (Y53C10A.5) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_060635]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:00072322 cell stage
  • UBERON:0000106zygote stage
  • UBERON:0000107cleavage stage
  • UBERON:0000104life cycle
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000068embryo stage
3.52e3
  • 3.52e3
  • 4.07e3
  • 4.22e3
  • 4.63e3
  • 4.89e3
  • 4.90e3
  • 5.18e3
  • 5.49e3
  • 5.78e3
  • 7.17e3
  • 7.76e3
  • 9.26e3
  • 1.66e4
90.81314
  • 90.81314
  • 89.36712
  • 88.98308
  • 87.89628
  • 87.22748
  • 87.21189
  • 86.45967
  • 85.66800
  • 84.89975
  • 81.28310
  • 79.71675
  • 75.82042
  • 56.59369
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
5.15e3
  • 5.15e3
  • 5.47e3
  • 6.31e3
  • 7.10e3
  • 7.34e3
  • 7.45e3
  • 7.53e3
  • 7.80e3
  • 7.81e3
  • 7.85e3
  • 8.19e3
  • 8.38e3
  • 1.03e4
  • 1.14e4
86.53931
  • 86.53931
  • 85.70489
  • 83.51079
  • 81.45054
  • 80.82545
  • 80.53561
  • 80.33205
  • 79.61779
  • 79.59778
  • 79.49320
  • 78.60135
  • 78.11114
  • 73.03882
  • 70.27348
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
5.55e3
  • 5.55e3
  • 5.68e3
  • 6.57e3
  • 6.90e3
  • 7.77e3
85.49571
  • 85.49571
  • 85.15480
  • 82.85134
  • 81.96789
  • 79.71623
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
5.69e3
  • 5.69e3
85.12523
  • 85.12523
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLAL033536
EnsemblWBGene00013136 (Y53C10A.5)
Uniprot/SPTREMBLQ9XW52, Q9XW52_CAEEL
WormBaseWBGene00013136

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