C. elegans Gene: Y56A3A.33 - WBGene00013244 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00013244
NameY56A3A.33
DescriptionCaenorhabditis elegans Protein Y56A3A.33 (Y56A3A.33) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_067164]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • UBERON:00072322 cell stage
  • UBERON:0000106zygote stage
  • UBERON:0000107cleavage stage
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000068embryo stage
3.13e3
  • 3.13e3
  • 3.91e3
  • 4.13e3
  • 5.50e3
  • 1.25e4
  • 1.27e4
  • 1.28e4
  • 1.36e4
  • 1.36e4
  • 1.41e4
  • 1.43e4
  • 1.57e4
  • 1.73e4
91.81503
  • 91.81503
  • 89.77990
  • 89.22294
  • 85.64692
  • 67.40283
  • 66.87871
  • 66.60963
  • 64.45954
  • 64.40705
  • 63.14051
  • 62.76664
  • 59.00179
  • 54.74028
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
5.47e3
  • 5.47e3
  • 7.24e3
  • 9.89e3
  • 1.04e4
  • 1.24e4
  • 1.25e4
  • 1.31e4
  • 1.50e4
  • 1.57e4
  • 1.62e4
  • 1.73e4
  • 1.78e4
  • 2.08e4
  • 2.22e4
85.70898
  • 85.70898
  • 81.09613
  • 74.16254
  • 72.91325
  • 67.64770
  • 67.21805
  • 65.85430
  • 60.91702
  • 58.88590
  • 57.66726
  • 54.86066
  • 53.58740
  • 45.63647
  • 42.02696
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
7.51e3
  • 7.51e3
80.37900
  • 80.37900
AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
  • 8.75e3
  • 9.46e3
  • 1.07e4
  • 1.22e4
79.27255
  • 79.27255
  • 77.13377
  • 75.29196
  • 72.07320
  • 68.22436
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
  • 8.94e3
78.91524
  • 78.91524
  • 76.64272
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLAC006620, AL132860
EnsemblWBGene00013244 (Y56A3A.33)
Uniprot/SPTREMBLQ9N5W0, Q9N5W0_CAEEL, Q9U220, Q9U220_CAEEL
WormBaseWBGene00013244

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