C. elegans Gene: Y87G2A.1 - WBGene00013593 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00013593
NameY87G2A.1
DescriptionCaenorhabditis elegans Protein Y87G2A.1 (Y87G2A.1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_060972]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:0000109gastrula stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:00072322 cell stage
  • UBERON:0000107cleavage stage
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
2.92e3
  • 2.92e3
  • 3.20e3
  • 3.24e3
  • 3.25e3
  • 3.46e3
  • 5.93e3
  • 6.59e3
  • 7.25e3
  • 7.71e3
  • 7.73e3
  • 8.91e3
  • 9.76e3
  • 1.65e4
92.37934
  • 92.37934
  • 91.65306
  • 91.53550
  • 91.52460
  • 90.97081
  • 84.52355
  • 82.78618
  • 81.07269
  • 79.86023
  • 79.81958
  • 76.71554
  • 74.50155
  • 56.84237
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
  • 3.88e3
  • 4.23e3
  • 5.07e3
  • 6.63e3
90.11908
  • 90.11908
  • 89.87154
  • 88.96307
  • 86.75415
  • 82.66927
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • UBERON:0000068embryo stage
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
4.09e3
  • 4.09e3
  • 6.46e3
  • 7.10e3
  • 7.18e3
  • 7.25e3
  • 7.48e3
  • 7.76e3
  • 7.92e3
  • 9.08e3
  • 9.20e3
  • 9.45e3
  • 9.70e3
  • 1.01e4
  • 1.03e4
89.30764
  • 89.30764
  • 83.13301
  • 81.46295
  • 81.23420
  • 81.05148
  • 80.46568
  • 79.73161
  • 79.30771
  • 76.27136
  • 75.96086
  • 75.32604
  • 74.66948
  • 73.54269
  • 73.12097
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
4.95e3
  • 4.95e3
87.08071
  • 87.08071
AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
  • 5.56e3
86.33450
  • 86.33450
  • 85.47804
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLAL110500
EnsemblWBGene00013593 (Y87G2A.1)
Uniprot/SPTREMBLQ9U1Q6, Q9U1Q6_CAEEL
WormBaseWBGene00013593

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