C. elegans Gene: C02H6.1 - WBGene00015361 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00015361
NameC02H6.1
DescriptionCaenorhabditis elegans Protein C02H6.1 (C02H6.1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_072490]
OrganismCaenorhabditis elegans (nematode)
Orthologs(s)27 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000104life cycle
1.78e4
  • 1.78e4
  • 2.56e4
  • 2.61e4
53.24
  • 53.24
  • 32.80
  • 31.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
  • 2.58e4
47.97
  • 47.97
  • 32.27
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000024L1 larva Ce (C elegans)
2.08e4
  • 2.08e4
  • 2.18e4
  • 2.19e4
  • 2.24e4
  • 2.27e4
45.39
  • 45.39
  • 42.93
  • 42.71
  • 41.19
  • 40.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Caenorhabditis1 geneCompare expression
Bilateria2 genesCompare expression

Paralogy information comes from OMA : WBGene00015361.

Cross-references

EnsemblWBGene00015361 (C02H6.1)
WormBaseWBGene00015361
EMBLFO080295
Uniprot/SPTREMBLO17053, O17053_CAEEL

Do not show this banner again