C. elegans Gene: dyci-1 - WBGene00015927 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00015927
Namedyci-1
DescriptionCaenorhabditis elegans Protein DYCI-1 (dyci-1) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_068637]
OrganismCaenorhabditis elegans (nematode)
Orthologs(s)48 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
2.25e3
  • 2.25e3
94.10
  • 94.10
AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
  • 2.60e3
  • 2.82e3
  • 2.99e3
  • 3.07e3
93.94
  • 93.94
  • 93.19
  • 92.62
  • 92.16
  • 91.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000107cleavage stage
  • UBERON:00072322 cell stage
  • UBERON:0000109gastrula stage
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000106zygote stage
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000068embryo stage
2.58e3
  • 2.58e3
  • 2.67e3
  • 2.87e3
  • 2.88e3
  • 2.93e3
  • 3.40e3
  • 3.47e3
  • 4.83e3
  • 7.15e3
  • 7.20e3
  • 7.78e3
  • 8.07e3
93.24
  • 93.24
  • 92.99
  • 92.48
  • 92.46
  • 92.32
  • 91.10
  • 90.90
  • 87.34
  • 81.27
  • 81.14
  • 79.60
  • 78.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
3.51e3
  • 3.51e3
  • 5.29e3
  • 5.70e3
  • 5.91e3
  • 6.19e3
  • 6.31e3
  • 6.97e3
  • 7.11e3
  • 7.15e3
  • 7.54e3
  • 7.90e3
  • 8.10e3
  • 8.74e3
  • 8.90e3
90.81
  • 90.81
  • 86.14
  • 85.05
  • 84.51
  • 83.78
  • 83.47
  • 81.73
  • 81.35
  • 81.27
  • 80.24
  • 79.29
  • 78.76
  • 77.10
  • 76.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
4.16e3
  • 4.16e3
  • 6.10e3
89.09
  • 89.09
  • 84.02
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Ecdysozoa5 species9 genesCompare expression
Bilateria25 species48 genesCompare expression

Orthology information comes from OMA : WBGene00015927.

Cross-references

EnsemblWBGene00015927 (dyci-1)
WormBaseWBGene00015927
EMBLFO080597
Uniprot/SPTREMBLO45087, O45087_CAEEL

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