C. elegans Gene: C30B5.2 - WBGene00016244 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00016244
NameC30B5.2
DescriptionCaenorhabditis elegans Protein C30B5.2, isoform a (C30B5.2) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_062837]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)q7jpi9, q7jpj0, q95qs8

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • WBls:0000063newly molted young adult hermaphrodite Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • UBERON:0000107cleavage stage
  • UBERON:0000068embryo stage
  • WBls:0000024L1 larva Ce (C elegans)
928
  • 928
  • 967
  • 976
  • 1.08e3
  • 1.12e3
  • 1.44e3
  • 1.49e3
  • 1.54e3
  • 1.57e3
  • 1.71e3
  • 2.51e3
  • 3.06e3
  • 3.81e3
97.57821
  • 97.57821
  • 97.47747
  • 97.45281
  • 97.18372
  • 97.07661
  • 96.24437
  • 96.10737
  • 95.96703
  • 95.88944
  • 95.53780
  • 93.43317
  • 91.99632
  • 90.04439
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
1.02e3
  • 1.02e3
97.35030
  • 97.35030
AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
  • 1.07e3
  • 1.10e3
  • 1.20e3
  • 1.59e3
97.25559
  • 97.25559
  • 97.20421
  • 97.13043
  • 96.86053
  • 95.83661
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
1.15e3
  • 1.15e3
  • 1.51e3
97.00671
  • 97.00671
  • 96.04598
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
1.69e3
  • 1.69e3
  • 1.78e3
  • 1.92e3
  • 2.22e3
  • 2.71e3
  • 3.19e3
  • 3.53e3
  • 4.25e3
  • 4.97e3
  • 5.68e3
  • 6.60e3
  • 6.86e3
  • 8.76e3
  • 8.80e3
95.57849
  • 95.57849
  • 95.34601
  • 94.97726
  • 94.20916
  • 92.92511
  • 91.65836
  • 90.78082
  • 88.89038
  • 87.00923
  • 85.16695
  • 82.76651
  • 82.08308
  • 77.11977
  • 77.01187
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLFO080719
EnsemblWBGene00016244 (C30B5.2)
Uniprot/SWISSPROTQ18319, VPS55_CAEEL
WormBaseWBGene00016244

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