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C. elegans Gene: F42H10.3 - WBGene00018367 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00018367
NameF42H10.3
DescriptionCaenorhabditis elegans Protein F42H10.3, isoform a (F42H10.3) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_066473]
OrganismCaenorhabditis elegans (nematode)
Synonym(s)p34417, p34421, q6ahr7
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000107cleavage stage
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:0000109gastrula stage
  • UBERON:0000068embryo stage
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • UBERON:00072322 cell stage
2.49e3
  • 2.49e3
  • 3.86e3
  • 4.02e3
  • 4.66e3
  • 6.32e3
  • 8.22e3
  • 8.42e3
  • 9.59e3
  • 1.05e4
  • 1.16e4
  • 1.81e4
93.47
  • 93.47
  • 89.87
  • 89.47
  • 87.79
  • 83.43
  • 78.46
  • 77.94
  • 74.86
  • 72.52
  • 69.68
  • 52.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
3.25e3
  • 3.25e3
91.48
  • 91.48
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000035L3 larva Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:0000027L2 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
5.94e3
  • 5.94e3
  • 6.46e3
  • 7.09e3
  • 8.40e3
  • 8.46e3
  • 9.42e3
  • 9.45e3
  • 9.65e3
  • 1.01e4
  • 1.02e4
  • 1.08e4
  • 1.12e4
  • 1.16e4
  • 1.20e4
84.44
  • 84.44
  • 83.08
  • 81.42
  • 77.98
  • 77.83
  • 75.32
  • 75.22
  • 74.70
  • 73.62
  • 73.34
  • 71.82
  • 70.62
  • 69.61
  • 68.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
7.00e3
  • 7.00e3
  • 1.08e4
81.66
  • 81.66
  • 71.81
AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
7.33e3
  • 7.33e3
  • 7.44e3
  • 7.70e3
  • 8.01e3
  • 8.63e3
80.79
  • 80.79
  • 80.51
  • 79.81
  • 79.00
  • 77.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Orthologs

Cross-references

EnsemblWBGene00018367 (F42H10.3)
WormBaseWBGene00018367
EMBLFO080327
Uniprot/SPTREMBLL8E951, L8E951_CAEEL
Uniprot/SWISSPROTLASP1_CAEEL, P34416

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