C. elegans Gene: T10B5.3 - WBGene00020389 - Caenorhabditis elegans (nematode)

General information

Ensembl IDWBGene00020389
NameT10B5.3
DescriptionCaenorhabditis elegans Protein T10B5.3 (T10B5.3) mRNA, complete cds [Source:RefSeq mRNA;Acc:NM_071118]
OrganismCaenorhabditis elegans (nematode)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • WBls:000000928-cell embryo Ce (C elegans)
  • UBERON:00072322 cell stage
  • UBERON:0000109gastrula stage
  • UBERON:0000107cleavage stage
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.04e3
  • 1.04e3
  • 1.07e3
  • 1.21e3
  • 1.36e3
  • 2.21e3
  • 2.34e3
  • 2.38e3
  • 2.85e3
  • 3.19e3
  • 3.35e3
  • 3.53e3
  • 5.72e3
97.28
  • 97.28
  • 97.20
  • 96.83
  • 96.43
  • 94.21
  • 93.87
  • 93.77
  • 92.53
  • 91.64
  • 91.23
  • 90.75
  • 85.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007023adult organism
  • WBls:000067620-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000707-10 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:00000685-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
  • 2.00e3
  • 2.19e3
  • 3.05e3
  • 3.90e3
96.15
  • 96.15
  • 94.75
  • 94.25
  • 92.01
  • 89.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005451pharyngeal muscle cell (C elegans)
  • WBls:0000021fully-elongated embryo Ce (C elegans)
1.80e3
  • 1.80e3
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • WBls:0000024L1 larva Ce (C elegans)
  • WBls:00000652-days post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
  • UBERON:0000068embryo stage
  • WBls:0000038L4 larva Ce (C elegans)
  • WBls:00006739-days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000039L4-adult lethargus Ce (C elegans)
  • WBls:000007411-15 days post-L4 adult hermaphrodite (C elegans)
  • WBls:0000035L3 larva Ce (C elegans)
  • WBls:0000036L3-L4 lethargus Ce (C elegans)
  • WBls:00000694-7 days post-L4 adult hermaphrodite Ce (C elegans)
  • WBls:0000027L2 larva Ce (C elegans)
2.69e3
  • 2.69e3
  • 3.27e3
  • 3.66e3
  • 3.78e3
  • 4.36e3
  • 4.62e3
  • 4.74e3
  • 5.38e3
  • 5.68e3
  • 6.54e3
  • 7.37e3
  • 8.09e3
  • 9.05e3
  • 9.92e3
92.94
  • 92.94
  • 91.44
  • 90.40
  • 90.09
  • 88.57
  • 87.88
  • 87.57
  • 85.90
  • 85.10
  • 82.85
  • 80.67
  • 78.80
  • 76.29
  • 74.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
WBbt:0005784germ line (C elegans)
  • UBERON:0000066fully formed stage
  • WBls:00000641-day post-L4 adult hermaphrodite Ce (C elegans)
3.88e3
  • 3.88e3
  • 4.04e3
89.84
  • 89.84
  • 89.42
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:
  • Affymetrix data: GEO
  • RNA-Seq data: GEO, SRA

Cross-references

EMBLFO081723
EnsemblWBGene00020389 (T10B5.3)
Uniprot/SPTREMBLO76407, O76407_CAEEL
WormBaseWBGene00020389

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