Danio rerio

Gene : cdkl1 - ENSDARG00000017329 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000017329

Name

cdkl1

Description

cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:NCBI gene;Acc:445316]

Synonym(s)

zgc:101002

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000473testis96.308.93e-10See source data
RSCAIE
UBERON:2001257medial floor plate69.994.00e-4See source data
RSCAIE
UBERON:0000080mesonephros66.655.40e-7See source data
RSCAIE
UBERON:0009620tail bud paraxial mesoderm65.880.003See source data
RSCAIE
UBERON:2007042spinal cord neural tube62.494.00e-4See source data
RSCAIE
UBERON:0007132head kidney61.851.26e-6See source data
RSCAIE
UBERON:0001474bone element61.188.32e-6See source data
RSCAIE
UBERON:0002548larva58.709.99e-6See source data
RSCAIE
CL:0000094granulocyte56.579.97e-4See source data
RSCAIE
UBERON:0004734gastrula54.780.002See source data
RSCAIE
UBERON:2007023posterior neural keel54.134.00e-4See source data
RSCAIE
UBERON:0004819kidney epithelium53.574.00e-4See source data
RSCAIE
UBERON:0003058hypochord53.504.00e-4See source data
RSCAIE
UBERON:0002120pronephros53.434.00e-4See source data
RSCAIE
UBERON:0002240spinal cord53.194.00e-4See source data
RSCAIE
UBERON:0006553renal duct53.034.00e-4See source data
RSCAIE
UBERON:0003060pronephric duct52.994.00e-4See source data
RSCAIE
UBERON:0006860swim bladder52.520.003See source data
RSCAIE
UBERON:2007028spinal cord neural keel50.004.00e-4See source data
RSCAIE
UBERON:2001256lateral floor plate49.994.00e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • EST data: Bgee
  • in situ hybridization data: ZFIN
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000206pharyngeal gill24.280.122See source data
RSCAIE
UBERON:0000948heart29.721See source data
RSCAIE
UBERON:0000160intestine31.460.11See source data
RSCAIE
UBERON:0002107liver33.970.936See source data
RSCAIE
UBERON:0002106spleen34.650.086See source data
RSCAIE
UBERON:0000019camera-type eye36.800.998See source data
RSCAIE
UBERON:0000966retina38.020.998See source data
RSCAIE
UBERON:0019248early embryo38.300.073See source data
RSCAIE
UBERON:0007010cleaving embryo42.250.961See source data
RSCAIE
UBERON:0002329somite43.850.94See source data
RSCAIE
UBERON:0003059presomitic mesoderm44.161See source data
RSCAIE
UBERON:0000992ovary44.660.069See source data
RSCAIE
UBERON:0002082cardiac ventricle48.450.975See source data
RSCAIE
UBERON:4000164caudal fin52.380.181See source data
RSCAIE
UBERON:0003982mature ovarian follicle54.710.069See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Astyanax mexicanus (Blind cave fish)

1 gene

Compare expression
Clupeocephala

11 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Teleostei

12 species

Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Neopterygii

13 species

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Euteleostomi

42 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)

43 genes

Compare expression
Chordata

43 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)

44 genes

Compare expression
Bilateria

47 species

Homo sapiens (human)
Mus musculus (mouse)
Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Drosophila pseudoobscura ()
Drosophila simulans ()

48 genes

Compare expression
Orthology information comes from OMA : ENSDARG00000017329.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Opisthokonta

235 genes

ENSDARG00000000857 mapk14a
ENSDARG00000001578 echs1
ENSDARG00000001969 txlng
ENSDARG00000002131 celf2
ENSDARG00000002168 tra2b
ENSDARG00000002635 FAM184A
ENSDARG00000002710 ncl
ENSDARG00000003022 limk1b
ENSDARG00000003867 cdk20
ENSDARG00000004581 sel1l
ENSDARG00000004794 ccdc146
ENSDARG00000005098 zgc:86764
ENSDARG00000005104 limk2
ENSDARG00000005315 celf1
ENSDARG00000005916 srpk3
ENSDARG00000005980 sfswap
ENSDARG00000005993 prc1b
ENSDARG00000006174 lrrc23
ENSDARG00000006283 waslb
ENSDARG00000006409 mapk12b
ENSDARG00000007135 cnot3a
ENSDARG00000007863 tra2a
ENSDARG00000008906 si:ch211-241e1.5
ENSDARG00000009023 ankrd28b
ENSDARG00000009525 tial1
ENSDARG00000009740 ppp1r7
ENSDARG00000009753 sf3b6
ENSDARG00000009870 mapk8b
ENSDARG00000010603 kctd9b
ENSDARG00000011020 hnrnpa1a
ENSDARG00000011407 col2a1b
ENSDARG00000012135 fbxl2
ENSDARG00000012405 col1a1a
ENSDARG00000013025 ints6
ENSDARG00000013351 cirbpb
ENSDARG00000013729 srsf6a
ENSDARG00000014081 fam184a
ENSDARG00000014113 wasla
ENSDARG00000014366 luc7l3
ENSDARG00000014402 smc1b
ENSDARG00000015068 txk
ENSDARG00000015149 wasa
ENSDARG00000015681 gsk3ab
ENSDARG00000015853 rnps1
ENSDARG00000016496 cdk8
ENSDARG00000016783 srsf6b
ENSDARG00000017617 alg6
ENSDARG00000017708 lrrc40
ENSDARG00000017803 gsk3ba
ENSDARG00000017842 syvn1
ENSDARG00000017901 tln2a
ENSDARG00000017931 ints6l
ENSDARG00000018241 mfap1
ENSDARG00000018319 arglu1b
ENSDARG00000018476 pak2b
ENSDARG00000018574 sf3b4
ENSDARG00000019130 plk2b
ENSDARG00000019223 arglu1a
ENSDARG00000019765 zgc:158803
ENSDARG00000019842 cnot3b
ENSDARG00000020001 rad23aa
ENSDARG00000020007 col1a2
ENSDARG00000021209 kctd9a
ENSDARG00000021550 rad23b
ENSDARG00000023578 lpp
ENSDARG00000025332 rbm28
ENSDARG00000025397 srsf3a
ENSDARG00000026028 ankrd44
ENSDARG00000026350 wasb
ENSDARG00000026476 tia1l
ENSDARG00000026577 cdk2
ENSDARG00000027552 mapk1
ENSDARG00000027734 srsf5b
ENSDARG00000028469 rps6ka2
ENSDARG00000028721 mapk14b
ENSDARG00000029501 gsk3aa
ENSDARG00000029818 srsf5a
ENSDARG00000030262 si:ch211-220i18.4
ENSDARG00000030634 pimr189
ENSDARG00000030665 CU929230.1
ENSDARG00000031293 dnajc9
ENSDARG00000031560 srpk1b
ENSDARG00000031678 col5a2a
ENSDARG00000031888 mapk8a
ENSDARG00000033437 rps6ka1
ENSDARG00000033501 zgc:64189
ENSDARG00000034256 cdk10
ENSDARG00000035325 srsf7a
ENSDARG00000035556 rps6ka3a
ENSDARG00000035809 col1a1b
ENSDARG00000036675 hnrnpa1b
ENSDARG00000036826 ankrd52a
ENSDARG00000037574 rps6kal
ENSDARG00000037777 stk16
ENSDARG00000038695 elavl1a
ENSDARG00000038754 plk3
ENSDARG00000039062 morn4
ENSDARG00000040732 elavl2
ENSDARG00000040853 shoc2
ENSDARG00000040985 itgbl1
ENSDARG00000041350 ankrd39
ENSDARG00000042021 mapk12a
ENSDARG00000043134 cux1b
ENSDARG00000043550 ENKD1
ENSDARG00000043858 cdk19
ENSDARG00000044436 rps6ka4
ENSDARG00000044811 cdk9
ENSDARG00000045639 elavl4
ENSDARG00000045836 mapk11
ENSDARG00000051916 cdk7
ENSDARG00000052468 gsk3bb
ENSDARG00000052536 tia1
ENSDARG00000052677 si:ch211-138g9.2
ENSDARG00000052923 zgc:113162
ENSDARG00000053431 si:ch211-257p13.3
ENSDARG00000055683 pimr191
ENSDARG00000055754 smc1a
ENSDARG00000055903 luc7l
ENSDARG00000056683 cdk5
ENSDARG00000057927 rps6ka3b
ENSDARG00000058203 smc1al
ENSDARG00000058346 sass6
ENSDARG00000058381 zgc:171775
ENSDARG00000058467 prpf40a
ENSDARG00000058470 mapk13
ENSDARG00000058471 plk1
ENSDARG00000058984 rad23ab
ENSDARG00000059351 hnrnpa3
ENSDARG00000059360 srsf3b
ENSDARG00000060169 mns1
ENSDARG00000060551 rps6ka5
ENSDARG00000062235 lrrc34
ENSDARG00000068103 cfap45
ENSDARG00000068177 pak2a
ENSDARG00000068190 pimr188
ENSDARG00000069093 col2a1a
ENSDARG00000069270 si:dkey-182i3.11
ENSDARG00000070108 dek
ENSDARG00000070127 nfxl1
ENSDARG00000070228 cdk6
ENSDARG00000070431 fip1l1b
ENSDARG00000070573 mapk3
ENSDARG00000070600 dyrk3
ENSDARG00000071360 morn2
ENSDARG00000073997 srpk1a
ENSDARG00000074121 dnmbp
ENSDARG00000074546 si:ch211-213a13.2
ENSDARG00000075380 kri1
ENSDARG00000075567 fbxl20
ENSDARG00000075733 zyx
ENSDARG00000077068 si:ch211-11p18.6
ENSDARG00000077364 mapk9
ENSDARG00000077732 alyref
ENSDARG00000077928 ccdc173
ENSDARG00000078520 ikbip
ENSDARG00000086326 CABZ01071939.1
ENSDARG00000087554 cdk1
ENSDARG00000087757 pimr190
ENSDARG00000087937 cdk4
ENSDARG00000089513 si:ch211-198e20.10
ENSDARG00000090752 plk2a
ENSDARG00000091760 cwf19l2
ENSDARG00000091783 si:dkeyp-71f10.5
ENSDARG00000092758 caiap
ENSDARG00000093154 pimr83
ENSDARG00000095086 cfdp1
ENSDARG00000097653 si:dkey-23k10.3
ENSDARG00000097753 slirp
ENSDARG00000098365 lrrc74b
ENSDARG00000098662 si:ch73-359m17.9
ENSDARG00000098822 tcerg1a
ENSDARG00000099075 CABZ01032982.1
ENSDARG00000099733 CIR1
ENSDARG00000099898 si:ch211-27e6.1
ENSDARG00000100188 rnps1
ENSDARG00000100672 FQ311920.1
ENSDARG00000100729 tln1
ENSDARG00000100815 srsf3a
ENSDARG00000100918 prc1a
ENSDARG00000101057 srsf7b
ENSDARG00000101299 CABZ01064248.1
ENSDARG00000101431 gas8
ENSDARG00000101583 CU927920.1
ENSDARG00000101744 elavl1b
ENSDARG00000102412 eci2
ENSDARG00000102546 cdk11b
ENSDARG00000102730 mapk10
ENSDARG00000102959 zgc:171220
ENSDARG00000103149 cog6
ENSDARG00000103443 vwde
ENSDARG00000103467 limk1a
ENSDARG00000103672 cirbpa
ENSDARG00000103959 pak1
ENSDARG00000104110 col4a2
ENSDARG00000105041 CABZ01024659.1
ENSDARG00000105249 si:dkey-65b13.9
ENSDARG00000105457 si:cabz01021066.1
ENSDARG00000105522 si:ch211-196f2.3
ENSDARG00000109827 tia1l
ENSDARG00000109970 rps6ka3b
ENSDARG00000110143 BX324164.5
ENSDARG00000110174 cfdp1
ENSDARG00000110267 celf2
ENSDARG00000110333 cdk8
ENSDARG00000110705 srsf7a
ENSDARG00000110726 BX649211.1
ENSDARG00000110835 mns1
ENSDARG00000110840 cdk1
ENSDARG00000111202 col2a1a
ENSDARG00000111402 plk2b
ENSDARG00000111440 pimr194
ENSDARG00000111590 cdk9
ENSDARG00000111745 plk1
ENSDARG00000111915 mapk1
ENSDARG00000111989 dnajc9
ENSDARG00000112058 shoc2
ENSDARG00000112185 ankrd52a
ENSDARG00000112364 pabpc1l
ENSDARG00000112397 mapk14a
ENSDARG00000112826 CABZ01058107.1
ENSDARG00000113206 pimr85
ENSDARG00000113629 wasla
ENSDARG00000113903 ints6l
ENSDARG00000114470 zgc:171775
ENSDARG00000114478 tia1
ENSDARG00000115056 pimr192
ENSDARG00000115099 rps6kal
ENSDARG00000115471 wasla
ENSDARG00000115625 dyrk3
ENSDARG00000116113 col1a1a
ENSDARG00000116467 CR626962.3
ENSDARG00000116564 shoc2
ENSDARG00000116641 rps6ka3a
ENSDARG00000116743 rnps1
ENSDARG00000116973 srpk1a
Compare expression
Paralogy information comes from OMA : ENSDARG00000017329.

Cross-references

Ensembl

ZFIN

UniProtKB/TrEMBL