TopAnat - Gene Expression Enrichment

GO-like enrichment of anatomical terms, mapped to genes by expression patterns. It is possible to run TopAnat using our BgeeDB R package. This is the same as this web-service, but with more flexibility in the choice of parameters and developmental stages, and is based on the topGO package.

Documentation
Examples
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Example 1

Autism spectrum associated genes from Satterstrom et al. 2020 https://doi.org/10.1016/j.cell.2019.12.036
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Example 2

Mouse genes mapped to the GO term "spermatogenesis".
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Example 3

Zebrafish 3R ohnologs from Roux et al. 2017 https://doi.org/10.1093/molbev/msx199 showing nervous system expression of 3R duplicates.
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Example 4

Pigmentation genes in rabbit.
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Example 5

COVID-19 related human genes.

Gene list

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