Xenopus laevis

Gene : med18.L - 108708096 - Xenopus laevis (African clawed frog)

General information

Gene identifier

108708096

Name

med18.L

Description

Mediator of RNA polymerase II transcription subunit 18

Synonym(s)

XELAEV_18012091mg,med18

Orthologs

Paralogs

Expression

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0000023oocyte73.582.82e-7See source data
RSCAIE
UBERON:0000992ovary72.265.48e-10See source data
RSCAIE
UBERON:0000473testis65.706.55e-7See source data
RSCAIE
UBERON:0000307blastula61.149.18e-6See source data
RSCAIE
UBERON:0002385muscle tissue59.133.64e-4See source data
RSCAIE
CL:0000025egg cell57.180.002See source data
RSCAIE
UBERON:0004734gastrula53.202.35e-4See source data
RSCAIE
UBERON:0000955brain51.742.32e-4See source data
RSCAIE
UBERON:0000945stomach50.311.46e-4See source data
RSCAIE
UBERON:0002107liver49.244.71e-4See source data
RSCAIE
UBERON:0000948heart46.317.48e-4See source data
RSCAIE
UBERON:0004455neurula embryo46.179.66e-5See source data
RSCAIE
UBERON:0001264pancreas44.700.003See source data
RSCAIE
UBERON:0002113kidney44.322.35e-4See source data
RSCAIE
UBERON:0000019camera-type eye43.882.66e-4See source data
RSCAIE
UBERON:0002048lung43.390.004See source data
RSCAIE
UBERON:0000160intestine43.030.001See source data
RSCAIE
UBERON:0001846internal ear42.430.003See source data
RSCAIE
UBERON:0000014zone of skin42.270.003See source data
RSCAIE
UBERON:0002106spleen39.600.009See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Tetrapoda

22 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Monodelphis domestica (opossum)
Compare expression
Sarcopterygii

23 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Monodelphis domestica (opossum)
Latimeria chalumnae (Coelacanth)
Compare expression
Euteleostomi

35 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Monodelphis domestica (opossum)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

36 genes

Compare expression
Chordata

36 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Canis lupus familiaris (dog)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Monodelphis domestica (opossum)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)

37 genes

Compare expression
Bilateria

39 species

Homo sapiens (human)
Mus musculus (mouse)
Danio rerio (zebrafish)
Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)
Canis lupus familiaris (dog)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Monodelphis domestica (opossum)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()

40 genes

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Xenopus

1 gene

446768 med18
Compare expression