Anguilla anguilla

Gene : LOC118206659 - 118206659 - Anguilla anguilla (European freshwater eel)

General information

Expressed in heart and 4 other cell types or tissues.

Gene identifier

118206659

Name

LOC118206659

Description

Synonym(s)

Orthologs

Paralogs

Expression graph

LOC118206659LOC118206659[-]anatomical entity[+]musculature[+]central nervous system[+]multicellular organism[+]reproductive systemExpression score020406080100Not expressedNo data
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Expression table

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000948heart62.838.19e-4See source data
RSCAIE
UBERON:0002385muscle tissue44.730.016See source data
RSCAIE
UBERON:0000992ovary39.250.023See source data
RSCAIE
UBERON:0007021sexually immature organism32.230.012See source data
RSCAIE
UBERON:0000955brain26.570.041See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000473testis5.310.412See source data
RSCAIE
UBERON:0002107liver12.571See source data
RSCAIE
UBERON:0006860swim bladder12.951See source data
RSCAIE
UBERON:0000160intestine14.670.69See source data
RSCAIE
UBERON:0000206pharyngeal gill16.550.358See source data
RSCAIE
UBERON:0001474bone element28.920.061See source data
RSCAIE
UBERON:0000080mesonephros50.360.08See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

8 species

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Chordata

9 species

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Compare expression
Bilateria

12 species

Drosophila melanogaster (fruit fly)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Branchiostoma lanceolatum (Common lancelet)
Drosophila pseudoobscura ()

Drosophila simulans ()

Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Vertebrata

2 genes

118212267 LOC118212267
118226883 LOC118226883

Compare expression: table | graph

Deuterostomia

8 genes

118207497 LOC118207497
118209072 ckmb
118212267 LOC118212267
118215468 LOC118215468
118226883 LOC118226883
118230473 LOC118230473
118231642 LOC118231642
118235602 ckma

Compare expression: table | graph

Cross-references

RefSeq

LOC118206659 (LOC118206659)