Canis lupus familiaris

Gene : SGCA - ENSCAFG00000017013 - Canis lupus familiaris (dog)

General information

Gene identifier

ENSCAFG00000017013

Name

SGCA

Description

sarcoglycan alpha [Source:VGNC Symbol;Acc:VGNC:46091]

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000992ovary97.661.42e-13See source data
RSCAIE
UBERON:0001723tongue97.271.56e-14See source data
RSCAIE
UBERON:0001135smooth muscle tissue95.864.45e-14See source data
RSCAIE
UBERON:0001134skeletal muscle tissue94.641.01e-13See source data
RSCAIE
UBERON:0002084heart left ventricle94.60<= 1.00e-14See source data
RSCAIE
UBERON:0002080heart right ventricle93.697.77e-12See source data
RSCAIE
UBERON:0002135mitral valve93.612.93e-11See source data
RSCAIE
UBERON:0002078right cardiac atrium93.029.91e-12See source data
RSCAIE
UBERON:0003382cardiac muscle of left ventricle92.56<= 1.00e-14See source data
RSCAIE
UBERON:0002369adrenal gland76.452.38e-9See source data
RSCAIE
UBERON:0000966retina75.469.97e-8See source data
RSCAIE
UBERON:0001235adrenal cortex73.361.84e-7See source data
RSCAIE
UBERON:0002108small intestine72.783.01e-9See source data
RSCAIE
CL:0000312keratinocyte72.461.35e-7See source data
RSCAIE
UBERON:0000945stomach72.439.15e-8See source data
RSCAIE
UBERON:0001155colon71.441.12e-10See source data
RSCAIE
UBERON:0000004nose70.721.03e-6See source data
RSCAIE
UBERON:0001255urinary bladder70.078.04e-10See source data
RSCAIE
UBERON:0002115jejunum65.101.85e-6See source data
RSCAIE
UBERON:0001911mammary gland64.514.13e-7See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000362renal medulla22.560.424See source data
RSCAIE
CL:0000094granulocyte26.320.737See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Carnivora

1 species

Compare expression
Laurasiatheria

6 species

Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Manis javanica (Malayan pangolin)
Compare expression
Boreoeutheria

22 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Theria

23 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Amniota

24 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Compare expression
Euteleostomi

35 species

Homo sapiens (human)
Mus musculus (mouse)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Orthology information comes from OMA : ENSCAFG00000017013.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
ChordataCompare expression
Paralogy information comes from OMA : ENSCAFG00000017013.

Cross-references