Gene : SGCA - ENSCAFG00000017013 - Canis lupus familiaris (dog)
General information
Gene identifier
ENSCAFG00000017013
Name
SGCA
Description
sarcoglycan alpha [Source:VGNC Symbol;Acc:VGNC:46091]
Organism
Synonym(s)
Orthologs
Paralogs
Expression
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entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0000992ovary | 97.66 | 1.42e-13 | See source data | |
| UBERON:0001723tongue | 97.27 | 1.56e-14 | See source data | |
| UBERON:0001135smooth muscle tissue | 95.86 | 4.45e-14 | See source data | |
| UBERON:0001134skeletal muscle tissue | 94.64 | 1.01e-13 | See source data | |
| UBERON:0002084heart left ventricle | 94.60 | <= 1.00e-14 | See source data | |
| UBERON:0002080heart right ventricle | 93.69 | 7.77e-12 | See source data | |
| UBERON:0002135mitral valve | 93.61 | 2.93e-11 | See source data | |
| UBERON:0002078right cardiac atrium | 93.02 | 9.91e-12 | See source data | |
| UBERON:0003382cardiac muscle of left ventricle | 92.56 | <= 1.00e-14 | See source data | |
| UBERON:0002369adrenal gland | 76.45 | 2.38e-9 | See source data | |
| UBERON:0000966retina | 75.46 | 9.97e-8 | See source data | |
| UBERON:0001235adrenal cortex | 73.36 | 1.84e-7 | See source data | |
| UBERON:0002108small intestine | 72.78 | 3.01e-9 | See source data | |
| CL:0000312keratinocyte | 72.46 | 1.35e-7 | See source data | |
| UBERON:0000945stomach | 72.43 | 9.15e-8 | See source data | |
| UBERON:0001155colon | 71.44 | 1.12e-10 | See source data | |
| UBERON:0000004nose | 70.72 | 1.03e-6 | See source data | |
| UBERON:0001255urinary bladder | 70.07 | 8.04e-10 | See source data | |
| UBERON:0002115jejunum | 65.10 | 1.85e-6 | See source data | |
| UBERON:0001911mammary gland | 64.51 | 4.13e-7 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Reported absence of expression
Show
entries
Anatomical entity | Expression score | FDR | Link to source data | Sources |
|---|---|---|---|---|
| UBERON:0000362renal medulla | 22.56 | 0.424 | See source data | |
| CL:0000094granulocyte | 26.32 | 0.737 | See source data |
Sources
A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data
Expression scores
3.25e4 lightgrey: low confidence scores
important score variation
Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.
Orthologs
Taxon Name | Species with orthologs | Gene(s) | Expression comparison | See details |
|---|---|---|---|---|
| Carnivora | 1 species | 1 gene | Compare expression | |
| Laurasiatheria | 6 species | 6 genes | Compare expression | |
| Boreoeutheria | 22 species | 22 genes | Compare expression | |
| Theria | 23 species | 23 genes | Compare expression | |
| Amniota | 24 species | 24 genes | Compare expression | |
| Euteleostomi | 35 species | 35 genes | Compare expression |
Paralogs (same species)
Taxon Name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Chordata | 1 gene | Compare expression |
Cross-references
Ensembl
EMBL
UniProtKB/TrEMBL
VGNC