Capra hircus

Gene : SGCA - ENSCHIG00000014532 - Capra hircus (Goat)

General information

Gene identifier

ENSCHIG00000014532

Name

SGCA

Description

sarcoglycan alpha [Source:NCBI gene;Acc:102184468]

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001401longissimus thoracis muscle96.646.61e-13See source data
RSCAIE
UBERON:0002107liver62.947.52e-6See source data
RSCAIE
UBERON:0003889fallopian tube47.888.18e-5See source data
RSCAIE
UBERON:0002247uterine horn38.962.58e-4See source data
RSCAIE
UBERON:0001417skin of neck37.662.85e-4See source data
RSCAIE
UBERON:0007365rumen35.267.51e-4See source data
RSCAIE
UBERON:0002106spleen33.900.004See source data
RSCAIE
UBERON:0001158descending colon31.400.002See source data
RSCAIE
UBERON:0002037cerebellum31.200.007See source data
RSCAIE
UBERON:0001870frontal cortex30.070.004See source data
RSCAIE
UBERON:0000451prefrontal cortex30.010.002See source data
RSCAIE
UBERON:0000082adult mammalian kidney27.900.014See source data
RSCAIE
UBERON:0002116ileum27.140.005See source data
RSCAIE
UBERON:0002369adrenal gland24.720.02See source data
RSCAIE
UBERON:0000992ovary23.960.012See source data
RSCAIE
UBERON:0000473testis22.710.02See source data
RSCAIE
UBERON:0010533metanephros cortex20.110.043See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002370thymus22.040.127See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Caprinae

1 species

Ovis aries (Sheep)
Compare expression
Bovidae

2 species

Bos taurus (cattle)
Ovis aries (Sheep)
Compare expression
Artiodactyla

3 species

Sus scrofa (pig)
Bos taurus (cattle)
Ovis aries (Sheep)
Compare expression
Laurasiatheria

6 species

Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Ovis aries (Sheep)
Manis javanica (Malayan pangolin)
Compare expression
Boreoeutheria

22 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Theria

23 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Amniota

24 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Compare expression
Euteleostomi

35 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Sus scrofa (pig)
Bos taurus (cattle)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Orthology information comes from OMA : ENSCHIG00000014532.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
ChordataCompare expression
Paralogy information comes from OMA : ENSCHIG00000014532.

Cross-references

Ensembl

HGNC

HGNC:10805 (SGCA)