Danio rerio

Gene : slc8a4b - ENSDARG00000037145 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000037145

Name

slc8a4b

Description

solute carrier family 8 member 4b [Source:ZFIN;Acc:ZDB-GENE-050809-103]

Synonym(s)

slc8a1b,ncx4,ncx4b

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000966retina56.380.045See source data
RSCAIE
UBERON:0000955brain50.820.016See source data
RSCAIE
CL:0000094granulocyte49.730.004See source data
RSCAIE
UBERON:0019248early embryo44.330.026See source data
RSCAIE
UBERON:0002106spleen39.370.032See source data
RSCAIE
UBERON:0002199integument36.740.036See source data
RSCAIE
UBERON:0000014zone of skin36.650.033See source data
RSCAIE
UBERON:0002548larva34.710.02See source data
RSCAIE
UBERON:0001474bone element26.100.014See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000473testis14.740.137See source data
RSCAIE
UBERON:0000206pharyngeal gill20.810.22See source data
RSCAIE
UBERON:0002385muscle tissue23.990.472See source data
RSCAIE
UBERON:0004734gastrula24.340.997See source data
RSCAIE
UBERON:0002415tail33.960.401See source data
RSCAIE
UBERON:0000160intestine34.200.064See source data
RSCAIE
UBERON:0002107liver34.640.867See source data
RSCAIE
UBERON:0000992ovary35.360.4See source data
RSCAIE
UBERON:0000948heart35.370.821See source data
RSCAIE
UBERON:0002082cardiac ventricle37.570.872See source data
RSCAIE
UBERON:0000080mesonephros39.670.097See source data
RSCAIE
UBERON:4000164caudal fin39.980.999See source data
RSCAIE
UBERON:0009620tail bud paraxial mesoderm41.800.992See source data
RSCAIE
UBERON:0007010cleaving embryo42.250.981See source data
RSCAIE
UBERON:0003982mature ovarian follicle42.940.486See source data
RSCAIE
UBERON:0003059presomitic mesoderm43.100.999See source data
RSCAIE
UBERON:0002329somite43.850.951See source data
RSCAIE
UBERON:0007132head kidney44.600.078See source data
RSCAIE
UBERON:0006860swim bladder47.830.17See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Astyanax mexicanus (Blind cave fish)

1 gene

Compare expression
Clupeocephala

11 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Euteleostomi

15 species

Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Compare expression
Bilateria

19 species

Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)

Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()
Drosophila simulans ()
Compare expression
Orthology information comes from OMA : ENSDARG00000037145.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000037145.

Cross-references

Ensembl

ZFIN

UniProtKB/TrEMBL