Danio rerio

Gene : RAB35 - ENSDARG00000102078 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000102078

Name

RAB35

Description

RAB35, member RAS oncogene family a [Source:NCBI gene;Acc:796454]

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0019248early embryo76.312.57e-6See source data
RSCAIE
UBERON:0000307blastula71.355.19e-6See source data
RSCAIE
UBERON:0004734gastrula65.221.64e-4See source data
RSCAIE
CL:0000094granulocyte63.262.44e-4See source data
RSCAIE
UBERON:0002329somite62.280.004See source data
RSCAIE
UBERON:0000992ovary62.106.03e-6See source data
RSCAIE
UBERON:0000966retina60.500.03See source data
RSCAIE
UBERON:0000473testis60.381.05e-4See source data
RSCAIE
UBERON:0000948heart57.850.001See source data
RSCAIE
UBERON:0007010cleaving embryo56.980.001See source data
RSCAIE
UBERON:0002385muscle tissue56.950.002See source data
RSCAIE
UBERON:0002107liver56.520.012See source data
RSCAIE
UBERON:0000080mesonephros56.441.24e-4See source data
RSCAIE
UBERON:0007132head kidney56.439.91e-5See source data
RSCAIE
UBERON:0000160intestine56.300.001See source data
RSCAIE
UBERON:0000955brain54.180.005See source data
RSCAIE
UBERON:0000206pharyngeal gill53.925.02e-4See source data
RSCAIE
UBERON:0002106spleen53.560.002See source data
RSCAIE
UBERON:0000014zone of skin50.150.005See source data
RSCAIE
UBERON:0001474bone element49.541.06e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:4000164caudal fin40.940.815See source data
RSCAIE
UBERON:0009620tail bud paraxial mesoderm49.860.715See source data
RSCAIE
UBERON:0003982mature ovarian follicle53.760.082See source data
RSCAIE
UBERON:0002082cardiac ventricle55.570.81See source data
RSCAIE
UBERON:0003059presomitic mesoderm59.330.335See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Clupeocephala

9 species

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Teleostei

10 species

Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Neopterygii

11 species

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Euteleostomi

41 species

Homo sapiens (human)
Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)

44 genes

Compare expression
Bilateria

45 species

Homo sapiens (human)
Mus musculus (mouse)
Drosophila melanogaster (fruit fly)
Caenorhabditis elegans (nematode)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Sus scrofa (pig)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Chlorocebus sabaeus (Green monkey)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Xenopus laevis (African clawed frog)

Xenopus tropicalis (western clawed frog)
Anolis carolinensis (green anole)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Drosophila pseudoobscura ()
Drosophila simulans ()

48 genes

Compare expression
Orthology information comes from OMA : ENSDARG00000102078.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Danio

1 gene

Compare expression
Opisthokonta

100 genes

ENSDARG00000004151 rab23
ENSDARG00000005651 hrasb
ENSDARG00000006553 rras
ENSDARG00000007257 rab5ab
ENSDARG00000008867 rap1b
ENSDARG00000010844 kras
ENSDARG00000012177 rab4b
ENSDARG00000012553 rap1aa
ENSDARG00000013161 zgc:55558
ENSDARG00000014340 rab11al
ENSDARG00000014462 rab3c
ENSDARG00000015649 rap2c
ENSDARG00000015807 rab22a
ENSDARG00000016059 rab5b
ENSDARG00000018107 rab3da
ENSDARG00000018602 rab5aa
ENSDARG00000019144 rab4a
ENSDARG00000019312 rab39ba
ENSDARG00000020261 rab2a
ENSDARG00000020497 rab7a
ENSDARG00000021287 rab7b
ENSDARG00000026484 rab15
ENSDARG00000026712 rab5c
ENSDARG00000029036 rab32a
ENSDARG00000029663 rab1ab
ENSDARG00000029885 rab41
ENSDARG00000031343 rab6bb
ENSDARG00000033056 zgc:171927
ENSDARG00000034215 rab42a
ENSDARG00000034522 rab6ba
ENSDARG00000034771 rab13
ENSDARG00000035188 rab14l
ENSDARG00000036252 rras2
ENSDARG00000036499 zgc:162171
ENSDARG00000036501 rab39bb
ENSDARG00000037884 rab30
ENSDARG00000037967 si:dkey-16l2.16
ENSDARG00000038225 nras
ENSDARG00000039162 rhebl1
ENSDARG00000040246 rap2ab
ENSDARG00000041450 rab11a
ENSDARG00000041878 rab11ba
ENSDARG00000042803 rab3c
ENSDARG00000043835 rab3ab
ENSDARG00000045027 rab9a
ENSDARG00000046106 rab10
ENSDARG00000052263 rab1aa
ENSDARG00000052954 rab25b
ENSDARG00000054032 rab24
ENSDARG00000056347 rab3aa
ENSDARG00000056479 rab1bb
ENSDARG00000057026 ran
ENSDARG00000058044 rab1ba
ENSDARG00000058425 rab35b
ENSDARG00000058800 rab25a
ENSDARG00000059404 rab43
ENSDARG00000062865 mras
ENSDARG00000067920 rab8a
ENSDARG00000068628 rab8b
ENSDARG00000069150 rit1
ENSDARG00000074246 rab14
ENSDARG00000074719 rab38c
ENSDARG00000075285 MRAS
ENSDARG00000077553 rap2aa
ENSDARG00000087243 zgc:100918
ENSDARG00000087346 rap1ab
ENSDARG00000087762 rab27b
ENSDARG00000090086 rab11bb
ENSDARG00000098497 hrasa
ENSDARG00000099279 ift27
ENSDARG00000100752 rab21
ENSDARG00000101170 rab42b
ENSDARG00000101534 rab3db
ENSDARG00000103032 rap2b
ENSDARG00000103391 rab9b
ENSDARG00000103714 rab6a
ENSDARG00000103934 megf8
ENSDARG00000103935 rab27a
ENSDARG00000104632 RERG
ENSDARG00000105254 CABZ01102115.2
ENSDARG00000109465 rab11a
ENSDARG00000109723 rab1bb
ENSDARG00000109738 si:ch73-116o1.2
ENSDARG00000109813 rab7a
ENSDARG00000110814 rab7a
ENSDARG00000111270 rab8b
ENSDARG00000111354 zgc:55558
ENSDARG00000111593 rab41
ENSDARG00000111642 rras2
ENSDARG00000112387 rap1ab
ENSDARG00000112889 rab38b
ENSDARG00000113377 si:dkey-16l2.16
ENSDARG00000113760 si:dkey-16l2.16
ENSDARG00000114110 rab8b
ENSDARG00000114357 rab3aa
ENSDARG00000114797 rab3b
ENSDARG00000114826 rab22a
ENSDARG00000114966 rab5b
ENSDARG00000115832 LO018490.1
ENSDARG00000116456 rab42b
Compare expression
Paralogy information comes from OMA : ENSDARG00000102078.