Homo sapiens

Gene : PSD4 - ENSG00000125637 - Homo sapiens (human)

General information

Gene identifier

ENSG00000125637

Name

PSD4

Description

pleckstrin and Sec7 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19096]

Synonym(s)

efa6b,tic

Orthologs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
CL:0000094granulocyte97.602.62e-14See source data
RSCAIE
UBERON:0001114right lobe of liver94.58<= 1.00e-14See source data
RSCAIE
UBERON:0000178blood94.47<= 1.00e-14See source data
RSCAIE
UBERON:0002106spleen93.17<= 1.00e-14See source data
RSCAIE
UBERON:0035827right adrenal gland cortex91.89<= 1.00e-14See source data
RSCAIE
CL:0000576monocyte91.57<= 1.00e-14See source data
RSCAIE
UBERON:0000029lymph node91.39<= 1.00e-14See source data
RSCAIE
UBERON:0035825left adrenal gland cortex90.76<= 1.00e-14See source data
RSCAIE
UBERON:0002372tonsil90.67<= 1.00e-14See source data
RSCAIE
UBERON:0001119right lobe of thyroid gland90.633.82e-14See source data
RSCAIE
UBERON:0001154vermiform appendix90.10<= 1.00e-14See source data
RSCAIE
CL:0002092bone marrow cell90.056.65e-5See source data
RSCAIE
UBERON:0035834lower esophagus mucosa89.966.22e-12See source data
RSCAIE
UBERON:0001120left lobe of thyroid gland89.801.61e-13See source data
RSCAIE
UBERON:0003454small intestine Peyer's patch89.542.70e-14See source data
RSCAIE
UBERON:0004991mucosa of transverse colon89.276.45e-14See source data
RSCAIE
UBERON:0001044saliva-secreting gland88.08<= 1.00e-14See source data
RSCAIE
UBERON:0001830minor salivary gland88.002.05e-13See source data
RSCAIE
UBERON:0001150body of pancreas87.662.26e-12See source data
RSCAIE
UBERON:0001161body of stomach86.83<= 1.00e-14See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • EST data: Bgee
  • single-cell RNA-Seq data: Bgee
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0003911choroid plexus epithelium48.890.429See source data
RSCAIE
UBERON:0004797blood vessel layer49.290.605See source data
RSCAIE
UBERON:0000941cranial nerve II49.580.1See source data
RSCAIE
UBERON:0007023adult organism53.040.077See source data
RSCAIE
CL:0000019sperm53.320.535See source data
RSCAIE
UBERON:0001385tibialis anterior54.700.1See source data
RSCAIE
UBERON:0002080heart right ventricle56.750.726See source data
RSCAIE
UBERON:0006566left ventricle myocardium57.170.962See source data
RSCAIE
UBERON:0001966substantia nigra pars reticulata57.370.365See source data
RSCAIE
UBERON:0001965substantia nigra pars compacta57.780.451See source data
RSCAIE
UBERON:0003379cardiac muscle of right atrium57.980.954See source data
RSCAIE
UBERON:0007227superior vestibular nucleus58.220.28See source data
RSCAIE
UBERON:0002476lateral globus pallidus58.410.571See source data
RSCAIE
UBERON:0007318saphenous vein58.500.395See source data
RSCAIE
UBERON:0001231nephron tubule58.520.164See source data
RSCAIE
UBERON:0005351paraflocculus58.740.997See source data
RSCAIE
UBERON:0002702middle frontal gyrus58.920.969See source data
RSCAIE
UBERON:0002736lateral nuclear group of thalamus58.970.535See source data
RSCAIE
UBERON:0004087vena cava59.130.297See source data
RSCAIE
UBERON:0002407pericardium59.140.361See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Homininae

3 species

Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Catarrhini

8 species

Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Simiiformes

9 species

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Compare expression
Primates

10 species

Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Compare expression
Euarchontoglires

14 species

Mus musculus (mouse)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Rattus norvegicus (rat)
Compare expression
Boreoeutheria

21 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Compare expression
Theria

22 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Mammalia

23 species

Mus musculus (mouse)
Canis lupus familiaris (dog)
Felis catus (cat)
Equus caballus (horse)
Bos taurus (cattle)
Capra hircus (Goat)
Ovis aries (Sheep)
Oryctolagus cuniculus (rabbit)
Cavia porcellus (guinea pig)
Ornithorhynchus anatinus (platypus)
Callithrix jacchus (White-tufted-ear marmoset)
Cercocebus atys (Sooty mangabey)
Macaca fascicularis (Crab-eating macaque)
Macaca mulatta (macaque)
Macaca nemestrina (Pig-tailed macaque)
Papio anubis (Olive baboon)
Gorilla gorilla (gorilla)
Pan paniscus (bonobo)
Pan troglodytes (chimpanzee)
Microcebus murinus (Gray mouse lemur)
Manis javanica (Malayan pangolin)
Rattus norvegicus (rat)
Monodelphis domestica (opossum)
Compare expression
Orthology information comes from OMA : ENSG00000125637.

Cross-references