Search Genes

Gene : Sgca - ENSMUSG00000001508 - Mus musculus (mouse)

General information

Gene identifier

ENSMUSG00000001508

Name

Sgca

Description

sarcoglycan, alpha (dystrophin-associated glycoprotein) [Source:MGI Symbol;Acc:MGI:894698]

Organism

Mus musculus (mouse)

Synonym(s)

asg,50dag,adhalin

Orthologs

35 orthologs

Paralogs

1 paralogs

Source data

Retrieve all processed expression values for that gene

Expression

80%

Reported absence of expression

Anat. entity and cell typesDev. stageSexStrain

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entries

Anatomical entity	Expression score	FDR	Link to source data	Sources
UBERON:0001904habenula	39.40	0.639	See source data	RSCAIE
UBERON:0002143dorsal tegmental nucleus	39.40	0.836	See source data	RSCAIE
UBERON:0002191subiculum	39.46	0.836	See source data	RSCAIE
UBERON:0001722medial vestibular nucleus	39.47	0.813	See source data	RSCAIE
UBERON:0001927medial geniculate body	39.48	0.788	See source data	RSCAIE
UBERON:0013531retrosplenial region	39.49	0.857	See source data	RSCAIE
UBERON:0005383caudate-putamen	39.50	0.788	See source data	RSCAIE
UBERON:0001935ventromedial nucleus of hypothalamus	39.50	0.703	See source data	RSCAIE
UBERON:0002206mammillary body	39.52	0.762	See source data	RSCAIE
UBERON:0001926lateral geniculate body	39.57	0.945	See source data	RSCAIE
UBERON:0002739medial dorsal nucleus of thalamus	39.57	0.893	See source data	RSCAIE
UBERON:0002691ventral tegmental area	39.59	0.639	See source data	RSCAIE
UBERON:0001934dorsomedial nucleus of hypothalamus	39.59	0.672	See source data	RSCAIE
UBERON:0002890anterior amygdaloid area	39.62	0.762	See source data	RSCAIE
UBERON:0002430lateral hypothalamic area	39.64	0.836	See source data	RSCAIE
UBERON:0002667lateral septal nucleus	39.72	0.857	See source data	RSCAIE
UBERON:0004720cerebellar vermis	39.74	0.762	See source data	RSCAIE
UBERON:0005293cerebellum lobe	39.77	0.639	See source data	RSCAIE
UBERON:0004876urogenital fold	39.90	0.962	See source data	RSCAIE
UBERON:0001989superior cervical ganglion	39.93	0.813	See source data	RSCAIE

Showing 41 to 60 of 169 entries

Sources

A Affimetrix

E EST

I In Situ

R RNA-Seq

SC scRNA-Seq

datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
in situ hybridization data: MGI
single-cell RNA-Seq data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: ArrayExpress, GEO
in situ hybridization data: MGI
single-cell RNA-Seq data: SRA
RNA-Seq data: GEO, SRA

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison	See details

Showing 17 to 8 of 8 entries

Orthology information comes from OMA : ENSMUSG00000001508.

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison	See details

Showing 3 to 1 of 1 entries

Paralogy information comes from OMA : ENSMUSG00000001508.

Cross-references

CCDS

CCDS25266 (CCDS25266.1)

Ensembl

ENSMUSG00000001508 (Sgca)

MGI

MGI:894698 (Sgca)

EMBL

AB024920,AF019564,AF064081,AK075915,AL606480

UniProtKB/Swiss-Prot

P82350,SGCA_MOUSE

UniProtKB/TrEMBL

Q5SWB0,Q5SWB0_MOUSE,Q5SWB4,Q5SWB4_MOUSE