Species: Caenorhabditis elegans (nematode)
General information
Scientific name
Caenorhabditis elegans
Common name
nematode
Species ID
Genome source
Experiment list
Gene expression call files
Bgee provides calls of presence/absence of expression. Each call corresponds to a unique combination of a gene, an anatomical entity, a life stage, a sex, and a strain, with reported presence or absence of expression. More information in our documentation.
Anatomical entities only
- File without advanced column:
Caenorhabditis_elegans_expr_simple.tsv.gz(2.6 MB) - File with advanced column:
Caenorhabditis_elegans_expr_simple.tsv.gz(4.3 MB)
Anatomical entities, developmental stages, sexes and strains
- File without advanced column:
Caenorhabditis_elegans_expr_simple_all_conditions.tsv.gz(14.1 MB) - File with advanced column:
Caenorhabditis_elegans_expr_advanced_all_conditions.tsv.gz(23.5 MB)
Processed expression value files
Bgee provides annotations and experiment annotations, and processed expression values. More information in our documentation.
Affymetrix
- Experiments/chips annotations and meta data:
Caenorhabditis_elegans_Affymetrix_experiments_chips.tar.gz(17.0 KB) - Data (signal intensities):
Caenorhabditis_elegans_Affymetrix_probesets.tar.gz(45.6 MB)
RNA-Seq
- Experiments/libraries annotations and meta data:
Caenorhabditis_elegans_RNA-Seq_experiments_libraries.tar.gz(12.2 KB) - Data (read counts, TPMs):
Caenorhabditis_elegans_RNA-Seq_read_counts_TPM.tar.gz(86.9 MB)
Full length RNA-Seq
No data
Droplet based RNA-Seq
No data