Species: Sus scrofa (pig)
General information
Scientific name
Sus scrofa
Common name
pig
Species ID
Genome source
Experiment list
Gene expression call files
Bgee provides calls of presence/absence of expression. Each call corresponds to a unique combination of a gene, an anatomical entity, a life stage, a sex, and a strain, with reported presence or absence of expression. More information in our documentation.
Anatomical entities only
- File without advanced column:
Sus_scrofa_expr_simple.tsv.gz(24.4 MB) - File with advanced column:
Sus_scrofa_expr_simple.tsv.gz(37.8 MB)
Anatomical entities, developmental stages, sexes and strains
- File without advanced column:
Sus_scrofa_expr_simple_all_conditions.tsv.gz(64.8 MB) - File with advanced column:
Sus_scrofa_expr_advanced_all_conditions.tsv.gz(122.9 MB)
Processed expression value files
Bgee provides annotations and experiment annotations, and processed expression values. More information in our documentation.
Affymetrix
No data
RNA-Seq
- Experiments/libraries annotations and meta data:
Sus_scrofa_RNA-Seq_experiments_libraries.tar.gz(204.0 KB) - Data (read counts, TPMs):
Sus_scrofa_RNA-Seq_read_counts_TPM.tar.gz(1.6 GB)
Full length RNA-Seq
No data
Droplet based RNA-Seq
- Experiments/libraries annotations and meta data:
Sus_scrofa_Droplet_Based_SC_RNA-Seq_experiments_libraries.tar.gz(2.9 KB) - Processed expression values (UMI counts, CPMs)
Sus_scrofa_Droplet-Based_SC_RNA-Seq_read_counts_CPM.tar.gz(45.7 MB) - Processed H5AD data per cell (UMI counts)
Sus_scrofa_droplet_based_h5ad.tar.gz(348.6 MB)