Search Genes

Gene : LOC118206722 - 118206722 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118206722

Name

LOC118206722

Description

Organism

Anguilla anguilla (European freshwater eel)

Synonym(s)

Orthologs

17 orthologs

Paralogs

12 paralogs

Source data

Retrieve all processed expression values for that gene

Expression

Anat. entity and cell typesDev. stageSexStrain

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entries

Anatomical entity	Expression score	FDR	Link to source data	Sources
UBERON:0000955brain	99.43	1.26e-10	See source data	RSCAIE
UBERON:0000992ovary	99.31	2.04e-12	See source data	RSCAIE
UBERON:0007021sexually immature organism	98.01	1.11e-11	See source data	RSCAIE
UBERON:0000206pharyngeal gill	97.40	1.55e-8	See source data	RSCAIE
UBERON:0000948heart	97.21	4.93e-9	See source data	RSCAIE
UBERON:0000160intestine	96.85	4.82e-8	See source data	RSCAIE
UBERON:0000473testis	95.95	2.39e-7	See source data	RSCAIE
UBERON:0006860swim bladder	95.83	1.52e-7	See source data	RSCAIE
UBERON:0001474bone element	93.35	1.74e-7	See source data	RSCAIE
UBERON:0002107liver	92.99	2.53e-6	See source data	RSCAIE
UBERON:0002385muscle tissue	91.43	4.48e-7	See source data	RSCAIE
UBERON:0000080mesonephros	83.70	5.59e-4	See source data	RSCAIE

Showing 1 to 12 of 12 entries

Sources

A Affimetrix

E EST

I In Situ

R RNA-Seq

SC scRNA-Seq

datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO, SRA

Reported absence of expression

Anat. entity and cell typesDev. stageSexStrain

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entries

No reported absence of expression for this gene

Orthologs

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Taxon Name	Species with orthologs	Gene(s)	Expression comparison
Teleostei	3 species Danio rerio (zebrafish) Esox lucius (Northern pike) Salmo salar (Atlantic salmon)	13 genes ENSDARG00000002344 tubb4b ENSDARG00000041723 TUBB4B ENSDARG00000098591 tubb2b ENSDARG00000116706 zgc:55461 ENSDARG00000117112 zgc:55461 ENSELUG00000020007 TUBB4B ENSELUG00000021633 ENSSSAG00000007644 LOC106574319 ENSSSAG00000010214 LOC106593669 ENSSSAG00000039318 tbb5 ENSSSAG00000072377 TBB1 ENSSSAG00000077200 TBB5 ENSSSAG00000079003 TBB2C	Compare expression
Neopterygii	4 species Danio rerio (zebrafish) Lepisosteus oculatus (Spotted gar) Esox lucius (Northern pike) Salmo salar (Atlantic salmon)	15 genes ENSDARG00000002344 tubb4b ENSDARG00000041723 TUBB4B ENSDARG00000098591 tubb2b ENSDARG00000116706 zgc:55461 ENSDARG00000117112 zgc:55461 ENSLOCG00000002441 TUBB4B ENSLOCG00000009036 zgc:65894 ENSELUG00000020007 TUBB4B ENSELUG00000021633 ENSSSAG00000007644 LOC106574319 ENSSSAG00000010214 LOC106593669 ENSSSAG00000039318 tbb5 ENSSSAG00000072377 TBB1 ENSSSAG00000077200 TBB5 ENSSSAG00000079003 TBB2C	Compare expression
Euteleostomi	6 species Danio rerio (zebrafish) Anolis carolinensis (green anole) Lepisosteus oculatus (Spotted gar) Esox lucius (Northern pike) Salmo salar (Atlantic salmon) Latimeria chalumnae (Coelacanth)	17 genes ENSDARG00000002344 tubb4b ENSDARG00000041723 TUBB4B ENSDARG00000098591 tubb2b ENSDARG00000116706 zgc:55461 ENSDARG00000117112 zgc:55461 ENSACAG00000015226 tubb4a ENSLOCG00000002441 TUBB4B ENSLOCG00000009036 zgc:65894 ENSELUG00000020007 TUBB4B ENSELUG00000021633 ENSSSAG00000007644 LOC106574319 ENSSSAG00000010214 LOC106593669 ENSSSAG00000039318 tbb5 ENSSSAG00000072377 TBB1 ENSSSAG00000077200 TBB5 ENSSSAG00000079003 TBB2C ENSLACG00000005477 TUBB4A	Compare expression

Showing 1 to 3 of 3 entries

Paralogs (same species)

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Taxon Name	Gene(s)	Expression comparison
Anguilla	4 genes 118212601 LOC118212601 118212602 LOC118212602 118228388 LOC118228388 118231743 LOC118231743	Compare expression
Teleostei	5 genes 118212601 LOC118212601 118212602 LOC118212602 118221830 LOC118221830 118228388 LOC118228388 118231743 LOC118231743	Compare expression
Neopterygii	6 genes 118212601 LOC118212601 118212602 LOC118212602 118216031 LOC118216031 118221830 LOC118221830 118228388 LOC118228388 118231743 LOC118231743	Compare expression
Gnathostomata	8 genes 118212601 LOC118212601 118212602 LOC118212602 118213793 tubb5 118216031 LOC118216031 118221830 LOC118221830 118228388 LOC118228388 118231743 LOC118231743 118234106 LOC118234106	Compare expression
Metazoa	11 genes 118212601 LOC118212601 118212602 LOC118212602 118213793 tubb5 118215741 LOC118215741 118216031 LOC118216031 118221830 LOC118221830 118225636 tubb6 118228388 LOC118228388 118231743 LOC118231743 118234106 LOC118234106 118234517 LOC118234517	Compare expression
Opisthokonta	12 genes 118211480 tubb1 118212601 LOC118212601 118212602 LOC118212602 118213793 tubb5 118215741 LOC118215741 118216031 LOC118216031 118221830 LOC118221830 118225636 tubb6 118228388 LOC118228388 118231743 LOC118231743 118234106 LOC118234106 118234517 LOC118234517	Compare expression

Showing 1 to 6 of 6 entries

Cross-references

RefSeq

LOC118206722 (LOC118206722)