Anguilla anguilla

Gene : LOC118231028 - 118231028 - Anguilla anguilla (European freshwater eel)

General information

Gene identifier

118231028

Name

LOC118231028

Description

Synonym(s)

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000160intestine98.646.85e-10See source data
RSCAIE
UBERON:0000992ovary96.251.08e-8See source data
RSCAIE
UBERON:0002385muscle tissue58.330.002See source data
RSCAIE
UBERON:0000473testis45.710.002See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0007021sexually immature organism19.030.091See source data
RSCAIE
UBERON:0006860swim bladder20.180.91See source data
RSCAIE
UBERON:0000206pharyngeal gill20.450.19See source data
RSCAIE
UBERON:0000955brain24.690.054See source data
RSCAIE
UBERON:0001474bone element27.540.075See source data
RSCAIE
UBERON:0000948heart31.600.088See source data
RSCAIE
UBERON:0000080mesonephros38.010.371See source data
RSCAIE
UBERON:0002107liver48.840.061See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Teleostei

10 species

Danio rerio (zebrafish)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)

Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Neopterygii

11 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)

Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Compare expression
Euteleostomi

12 species

Danio rerio (zebrafish)
Lepisosteus oculatus (Spotted gar)
Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)

Oryzias latipes (Japanese rice fish)

Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Latimeria chalumnae (Coelacanth)
Compare expression

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Metazoa

11 genes

118206931 LOC118206931
118208200 slc12a5b
118211609 slc12a5a
118215421 LOC118215421
118215764 LOC118215764
118225364 slc12a7b
118226719 LOC118226719
118226757 slc12a3
118227990 LOC118227990
118231832 LOC118231832
118233178 LOC118233178
Compare expression

Cross-references

RefSeq

LOC118231028 (LOC118231028)