Danio rerio

Gene : tnfsf10l - ENSDARG00000004196 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000004196

Name

tnfsf10l

Description

TNF superfamily member 10, like [Source:ZFIN;Acc:ZDB-GENE-010801-1]

Synonym(s)

tnfsf10-2,wu:fc12f06,dl1a,trail-like

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002385muscle tissue89.761.95e-7See source data
RSCAIE
UBERON:0000160intestine88.834.21e-7See source data
RSCAIE
UBERON:0002199integument87.905.55e-7See source data
RSCAIE
UBERON:4000164caudal fin87.884.38e-4See source data
RSCAIE
UBERON:0000014zone of skin87.855.09e-7See source data
RSCAIE
UBERON:0006860swim bladder82.545.76e-5See source data
RSCAIE
UBERON:0000206pharyngeal gill75.241.14e-5See source data
RSCAIE
UBERON:0009620tail bud paraxial mesoderm74.860.002See source data
RSCAIE
UBERON:0002548larva70.971.04e-5See source data
RSCAIE
UBERON:0001474bone element69.601.33e-6See source data
RSCAIE
UBERON:0003059presomitic mesoderm69.150.02See source data
RSCAIE
UBERON:0002329somite68.710.002See source data
RSCAIE
UBERON:0000948heart65.030.003See source data
RSCAIE
UBERON:0007132head kidney62.289.93e-4See source data
RSCAIE
UBERON:0000033head54.190.001See source data
RSCAIE
UBERON:0000955brain53.650.003See source data
RSCAIE
UBERON:0000473testis52.464.85e-4See source data
RSCAIE
UBERON:0000019camera-type eye52.320.003See source data
RSCAIE
UBERON:0002106spleen51.170.003See source data
RSCAIE
UBERON:0004734gastrula49.490.002See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0019248early embryo11.511See source data
RSCAIE
UBERON:0003982mature ovarian follicle23.471See source data
RSCAIE
UBERON:0000307blastula30.480.989See source data
RSCAIE
UBERON:0007010cleaving embryo42.250.956See source data
RSCAIE
UBERON:0000966retina45.740.47See source data
RSCAIE
UBERON:0002082cardiac ventricle68.690.196See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Astyanax mexicanus (Blind cave fish)

1 gene

Compare expression
Clupeocephala

9 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Teleostei

10 species

Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Neopterygii

11 species

Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Euteleostomi

17 species

Gallus gallus (chicken)
Meleagris gallopavo (Wild turkey)
Ornithorhynchus anatinus (platypus)
Xenopus laevis (African clawed frog)
Xenopus tropicalis (western clawed frog)
Lepisosteus oculatus (Spotted gar)
Anguilla anguilla (European freshwater eel)

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Nothobranchius furzeri (Turquoise killifish)
Latimeria chalumnae (Coelacanth)
Compare expression
Orthology information comes from OMA : ENSDARG00000004196.

Paralogs (same species)

Taxon Name
Gene(s)
Expression comparison
See details
Danio

1 gene

Compare expression
Neopterygii

2 genes

Compare expression
Paralogy information comes from OMA : ENSDARG00000004196.

Cross-references