Danio rerio

Gene : brd1b - ENSDARG00000051798 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000051798

Name

brd1b

Description

bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]

Synonym(s)

zgc:158610

Orthologs

Expression

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entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002329somite93.462.19e-4See source data
RSCAIE
UBERON:0003059presomitic mesoderm91.052.89e-4See source data
RSCAIE
UBERON:0007010cleaving embryo89.472.19e-4See source data
RSCAIE
UBERON:0000966retina89.002.99e-4See source data
RSCAIE
UBERON:0004734gastrula87.142.00e-7See source data
RSCAIE
UBERON:0009620tail bud paraxial mesoderm85.512.66e-4See source data
RSCAIE
UBERON:0000307blastula84.526.90e-8See source data
RSCAIE
UBERON:0000473testis84.203.88e-7See source data
RSCAIE
UBERON:0019248early embryo77.881.53e-6See source data
RSCAIE
UBERON:4000164caudal fin77.474.66e-4See source data
RSCAIE
UBERON:0003982mature ovarian follicle76.035.75e-4See source data
RSCAIE
UBERON:0002082cardiac ventricle75.890.004See source data
RSCAIE
UBERON:0006860swim bladder75.553.95e-4See source data
RSCAIE
UBERON:0002106spleen74.332.19e-5See source data
RSCAIE
UBERON:0007132head kidney71.718.67e-5See source data
RSCAIE
UBERON:0002548larva71.192.85e-5See source data
RSCAIE
UBERON:0000955brain70.845.23e-4See source data
RSCAIE
UBERON:0000206pharyngeal gill70.422.88e-5See source data
RSCAIE
CL:0000094granulocyte70.086.40e-5See source data
RSCAIE
UBERON:0002199integument69.441.63e-4See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

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entries

No reported absence of expression for this gene

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Otophysi

1 species

Astyanax mexicanus (Blind cave fish)

1 gene

Compare expression
Clupeocephala

10 species

Astyanax mexicanus (Blind cave fish)
Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)

Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Gasterosteus aculeatus (Three-spined stickleback)
Nothobranchius furzeri (Turquoise killifish)
Compare expression
Orthology information comes from OMA : ENSDARG00000051798.

Cross-references

Ensembl

ZFIN

UniProtKB/TrEMBL