Danio rerio

Gene : vsig8a - ENSDARG00000054050 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000054050

Name

vsig8a

Description

V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]

Synonym(s)

zgc:110326

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0002106spleen46.100.007See source data
RSCAIE
UBERON:0000992ovary45.680.037See source data
RSCAIE
UBERON:0002548larva45.020.001See source data
RSCAIE
UBERON:0007132head kidney43.300.019See source data
RSCAIE
UBERON:0000206pharyngeal gill42.260.004See source data
RSCAIE
UBERON:0000922embryo41.680.021See source data
RSCAIE
UBERON:0000033head40.760.031See source data
RSCAIE
UBERON:0019248early embryo40.100.049See source data
RSCAIE
UBERON:0000014zone of skin34.290.046See source data
RSCAIE
UBERON:0000473testis26.050.027See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0001474bone element10.850.311See source data
RSCAIE
UBERON:0002385muscle tissue22.600.557See source data
RSCAIE
CL:0000094granulocyte28.050.18See source data
RSCAIE
UBERON:0000966retina30.330.735See source data
RSCAIE
UBERON:0000160intestine32.060.098See source data
RSCAIE
UBERON:0002415tail34.360.325See source data
RSCAIE
UBERON:0000948heart38.790.517See source data
RSCAIE
UBERON:4000164caudal fin39.980.501See source data
RSCAIE
UBERON:0009620tail bud paraxial mesoderm41.800.489See source data
RSCAIE
UBERON:0007010cleaving embryo42.250.541See source data
RSCAIE
UBERON:0006860swim bladder43.000.295See source data
RSCAIE
UBERON:0003059presomitic mesoderm43.460.981See source data
RSCAIE
UBERON:0002329somite43.850.983See source data
RSCAIE
UBERON:0002082cardiac ventricle48.170.965See source data
RSCAIE
UBERON:0003982mature ovarian follicle48.730.196See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Clupeocephala

8 species

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)
Gadus morhua (Atlantic cod)
Poecilia reticulata (Guppy)
Oryzias latipes (Japanese rice fish)
Astatotilapia calliptera (Eastern happy)
Neolamprologus brichardi (Fairy cichlid)
Scophthalmus maximus (Turbot)
Compare expression
Orthology information comes from OMA : ENSDARG00000054050.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000054050.