Danio rerio

Gene : krt17 - ENSDARG00000094041 - Danio rerio (zebrafish)

General information

Gene identifier

ENSDARG00000094041

Name

krt17

Description

keratin 17 [Source:ZFIN;Acc:ZDB-GENE-060503-86]

Synonym(s)

si:dkeyp-113d7.7

Orthologs

Paralogs

Expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000014zone of skin99.08<= 1.00e-14See source data
RSCAIE
UBERON:0000206pharyngeal gill98.937.94e-14See source data
RSCAIE
UBERON:4000164caudal fin98.642.19e-4See source data
RSCAIE
UBERON:0002548larva98.56<= 1.00e-14See source data
RSCAIE
UBERON:0004734gastrula95.08<= 1.00e-14See source data
RSCAIE
UBERON:0009620tail bud paraxial mesoderm92.042.66e-4See source data
RSCAIE
UBERON:0002385muscle tissue71.872.32e-6See source data
RSCAIE
UBERON:0002329somite70.599.35e-4See source data
RSCAIE
UBERON:0003059presomitic mesoderm70.460.002See source data
RSCAIE
UBERON:0000033head67.443.34e-10See source data
RSCAIE
UBERON:0002106spleen66.771.09e-4See source data
RSCAIE
UBERON:0007383enveloping layer of ectoderm58.664.00e-4See source data
RSCAIE
UBERON:0000019camera-type eye53.621.89e-7See source data
RSCAIE
UBERON:0000307blastula49.980.001See source data
RSCAIE
UBERON:0000948heart47.853.14e-6See source data
RSCAIE
UBERON:0000955brain40.740.001See source data
RSCAIE
UBERON:0007132head kidney38.926.18e-6See source data
RSCAIE
UBERON:0002107liver38.486.25e-4See source data
RSCAIE
UBERON:0000473testis38.390.005See source data
RSCAIE
UBERON:0000966retina35.940.003See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

  • Affymetrix data: Bgee
  • in situ hybridization data: ZFIN
  • RNA-Seq data: Bgee

Sources of raw data:

Reported absence of expression

Show

entries

Anatomical entity
Expression score
FDR
Link to source data
Sources
UBERON:0000992ovary17.461See source data
RSCAIE
UBERON:0019248early embryo23.260.254See source data
RSCAIE
UBERON:0003982mature ovarian follicle23.471See source data
RSCAIE
UBERON:0000160intestine25.370.296See source data
RSCAIE
CL:0000094granulocyte28.700.166See source data
RSCAIE
UBERON:0002082cardiac ventricle42.030.969See source data
RSCAIE
UBERON:0007010cleaving embryo55.310.602See source data
RSCAIE

Sources

A Affimetrix
E EST
I In Situ
R RNA-Seq
SC scRNA-Seq
datano data

Expression scores

3.25e4 lightgrey: low confidence scores

important score variation

Expression scores of expression calls is based on the rank of a gene in a condition according to its expression levels (non-parametric statistics), normalized using the minimum and maximum Rank of the species. Values of Expression scores are between 0 and 100. Low score means that the gene is lowly expressed in the condition compared to other genes. Scores are normalized and comparable across genes, conditions and species.

Sources of annotations to anatomy and development:

Sources of raw data:

Orthologs

Taxon Name
Species with orthologs
Gene(s)
Expression comparison
See details
Clupeocephala

2 species

Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)







Compare expression
Teleostei

3 species

Anguilla anguilla (European freshwater eel)



Esox lucius (Northern pike)
Salmo salar (Atlantic salmon)







Compare expression
Orthology information comes from OMA : ENSDARG00000094041.

Paralogs (same species)

Cross-references